Curated BLAST for Genomes

 

Curated BLAST

Searching in Lactobacillus delbrueckii subsp. jakobsenii ZN7a-9 = DSM 26046 ZN7a-9 (GCF_000387565.1)

Found 61 curated entries in PaperBLAST's database that match '1.8.1.4' as complete word(s).

These curated entries have 46 distinct sequences.

Running ublast with E ≤ 0.01

Found 12 relevant proteins in Lactobacillus delbrueckii subsp. jakobsenii ZN7a-9 = DSM 26046 ZN7a-9, or try another query

B506_RS03865 B506_04153 WP_002878615.1: FAD-dependent oxidoreductase
is similar to:		 PaperBLAST

DLDH_HYMDI / P80647: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; EC 1.8.1.4 from Hymenolepis diminuta

 40% id,
85% cov

Q8MUB0: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Bombyx mori

 25% id,
66% cov

DLDH_CHATD / G0SB20: Dihydrolipoamide dehydrogenase; Lipoamide dehydrogenase component of pyruvate dehydrogenase complex; Pyruvate dehydrogenase complex E3 component; EC 1.8.1.4 from Chaetomium thermophilum

 26% id,
38% cov

More...

trxB B506_RS07220 B506_07603 WP_002879964.1: thioredoxin-disulfide reductase
is similar to:		 PaperBLAST

DLDH_HYMDI / P80647: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; EC 1.8.1.4 from Hymenolepis diminuta

 38% id,
91% cov

A4V929: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Acidianus ambivalens

 26% id,
72% cov

DLDH_BOVIN / F1N206: Dihydrolipoyl dehydrogenase, mitochondrial; Dihydrolipoamide dehydrogenase; EC 1.8.1.4 from Bos taurus

 26% id,
62% cov

More...

B506_RS03260 B506_03483 WP_002878324.1: NAD(P)/FAD-dependent oxidoreductase
is similar to:		 PaperBLAST

A5N930: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Clostridium kluyveri

 32% id,
98% cov

DLDH_CORGL / Q8NTE1: Dihydrolipoyl dehydrogenase; LPD; Dihydrolipoamide dehydrogenase; E3 component of alpha-ketoacid dehydrogenase complexes; EC 1.8.1.4 from Corynebacterium glutamicum

 33% id,
96% cov

DLDH1_GEOSE / P11959: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; E3 component of pyruvate complex; EC 1.8.1.4 from Geobacillus stearothermophilus
pdhD / GB|CAA37631.1: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Geobacillus stearothermophilus
P11959: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Geobacillus stearothermophilus

 30% id,
95% cov

More...

B506_RS08325 B506_08790 WP_002880338.1: NAD(P)/FAD-dependent oxidoreductase
is similar to:		 PaperBLAST

pdhD / GB|CAB13334.1: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Bacillus subtilis
pdhD / P21880: dihydrolipoyl dehydrogenase component subunit (EC 1.8.1.4) from Bacillus subtilis

 28% id,
94% cov

B6F1A8: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Microbacterium luteolum

 27% id,
98% cov

DLDH_THESS / P85207: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; EC 1.8.1.4 from Thermus scotoductus

 29% id,
90% cov

More...

B506_RS07155 B506_07528 WP_002879929.1: flavocytochrome c
is similar to:		 PaperBLAST

DLDH_AZOVI / P18925: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; E3 component of pyruvate complex; EC 1.8.1.4 from Azotobacter vinelandii
GI|142325: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Azotobacter vinelandii

 21% id,
88% cov

A0A0H2ZHZ0: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Pseudomonas aeruginosa

 25% id,
74% cov

DLDH_CORGL / Q8NTE1: Dihydrolipoyl dehydrogenase; LPD; Dihydrolipoamide dehydrogenase; E3 component of alpha-ketoacid dehydrogenase complexes; EC 1.8.1.4 from Corynebacterium glutamicum

 24% id,
71% cov

More...

B506_RS00535 B506_00575 WP_002876600.1: NAD(P)/FAD-dependent oxidoreductase
is similar to:		 PaperBLAST

lpdA / O84561: dihydrolipoyl dehydrogenase subunit (EC 1.8.1.4) from Chlamydia trachomatis

 28% id,
65% cov

pdhD / GB|CAB13334.1: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Bacillus subtilis
pdhD / P21880: dihydrolipoyl dehydrogenase component subunit (EC 1.8.1.4) from Bacillus subtilis

 24% id,
74% cov

DLDH_THESS / P85207: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; EC 1.8.1.4 from Thermus scotoductus

 30% id,
49% cov

More...

mnmG B506_RS05845 B506_06164 WP_002879417.1: tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
is similar to:		 PaperBLAST

lpdG / GI|1256717: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Pseudomonas putida

 25% id,
30% cov

DLDH_AZOVI / P18925: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; E3 component of pyruvate complex; EC 1.8.1.4 from Azotobacter vinelandii
GI|142325: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Azotobacter vinelandii

 52% id,
7% cov

B506_RS09085 B506_08715 WP_002880309.1: FAD-dependent oxidoreductase
is similar to:		 PaperBLAST

lpdG / GI|1256717: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Pseudomonas putida

 29% id,
25% cov

Q8VPK7: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Streptococcus pneumoniae

 30% id,
25% cov

DLDH_PSEFL / P14218: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; E3 component of 2-oxoglutarate dehydrogenase complex; EC 1.8.1.4 from Pseudomonas fluorescens

 29% id,
21% cov

More...

B506_RS06295 B506_06624 WP_002879550.1: hypothetical protein
is similar to:		 PaperBLAST

lpdA / B3TZD6: dihydrolipoamide dehydrogenase (EC 1.8.1.4) from Advenella kashmirensis

 30% id,
23% cov

B506_RS01600 WP_255217694.1: FMN-binding protein
is similar to:		 PaperBLAST

lpdA / O84561: dihydrolipoyl dehydrogenase subunit (EC 1.8.1.4) from Chlamydia trachomatis

 46% id,
9% cov

Q8MUB0: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Bombyx mori

 50% id,
8% cov

DLDH_CORGL / Q8NTE1: Dihydrolipoyl dehydrogenase; LPD; Dihydrolipoamide dehydrogenase; E3 component of alpha-ketoacid dehydrogenase complexes; EC 1.8.1.4 from Corynebacterium glutamicum

 57% id,
6% cov

glf B506_RS05785 B506_06094 WP_072557683.1: UDP-galactopyranose mutase
is similar to:		 PaperBLAST

DLDH_CHATD / G0SB20: Dihydrolipoamide dehydrogenase; Lipoamide dehydrogenase component of pyruvate dehydrogenase complex; Pyruvate dehydrogenase complex E3 component; EC 1.8.1.4 from Chaetomium thermophilum

 40% id,
9% cov

accB B506_RS01465 B506_01585 WP_002877462.1: acetyl-CoA carboxylase biotin carboxyl carrier protein
is similar to:		 PaperBLAST

acoL: TPP-dependent acetoin dehydrogenase complex, E3 component, dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Clostridium magnum

 36% id,
9% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 11 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory