Curated BLAST for Genomes

 

Curated BLAST

Searching in Hippea alviniae EP5-r (GCF_000420385.1)

Found 8 curated entries in PaperBLAST's database that match '1.3.8.6' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Hippea alviniae EP5-r, or try another query

G415_RS0100700 WP_022669656.1: acyl-CoA dehydrogenase family protein
is similar to:
PaperBLAST

Q3JP94: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Burkholderia pseudomallei

30% id,
96% cov

gcdH / Q88RH2: glutaryl-CoA dehydrogenase (EC 1.3.8.6) from Pseudomonas putida

30% id,
95% cov

B0EVL5: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Azoarcus sp.

28% id,
95% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory