Curated BLAST for Genomes

 

Curated BLAST

Searching in Hippea alviniae EP5-r (GCF_000420385.1)

Found 39 curated entries in PaperBLAST's database that match '6.3.5.4' as complete word(s).

These curated entries have 33 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Hippea alviniae EP5-r, or try another query

purF G415_RS0102565 WP_022670026.1: amidophosphoribosyltransferase
is similar to:
PaperBLAST

asnB / GB|CAB15032.1: asparagine synthase (glutamine-hydrolysing) 1; EC 6.3.5.4 from Bacillus subtilis

27% id,
26% cov

Q9SP20: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Helianthus annuus

28% id,
21% cov

asnO / GI|1934835: asparagine synthase (glutamine-hydrolysing) 3; EC 6.3.5.4 from Bacillus subtilis

27% id,
20% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory