Curated BLAST for Genomes

 

Curated BLAST

Searching in Methylohalobius crimeensis 10Ki (GCF_000421465.1)

Found 105 curated entries in PaperBLAST's database that match '1.2.1.3' as complete word(s).

These curated entries have 88 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Methylohalobius crimeensis 10Ki, or try another query

adh H035_RS0111795 WP_022949182.1: aldehyde dehydrogenase
is similar to:
PaperBLAST

Q4F895: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Rhodococcus erythropolis

74% id,
100% cov

ALDH_PARDP / A1B4L2: Aldehyde dehydrogenase; Acetaldehyde dehydrogenase; EC 1.2.1.3 from Paracoccus denitrificans
adh / A1B4L2: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Paracoccus denitrificans

76% id,
97% cov

Psest_2276: Aldehyde dehydrogenase (EC 1.2.1.3) from Pseudomonas stutzeri

70% id,
100% cov

More...

H035_RS0106590 WP_022948198.1: NAD-dependent succinate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

P51650: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Rattus norvegicus

56% id,
91% cov

aldA / RF|XP_658158.1: aldehyde dehydrogenase ALDH; EC 1.2.1.3 from Emericella nidulans

39% id,
93% cov

AL1A1_RAT / P51647: Aldehyde dehydrogenase 1A1; 3-deoxyglucosone dehydrogenase; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; Retinal dehydrogenase 1; RALDH 1; RalDH1; EC 1.2.1.19; EC 1.2.1.28; EC 1.2.1.3; EC 1.2.1.36 from Rattus norvegicus

37% id,
96% cov

More...

putA H035_RS0110405 WP_022948913.1: bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA
is similar to:
PaperBLAST

P76217: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Escherichia coli

33% id,
91% cov

A0A1U7EWW7: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Natronomonas pharaonis

32% id,
91% cov

AL7A1_BRANA / Q41247: Aldehyde dehydrogenase family 7 member A1; Antiquitin-1; Brassica turgor-responsive/drought-induced gene 26 protein; Btg-26; EC 1.2.1.3 from Brassica napus

30% id,
97% cov

More...

H035_RS0115725 WP_022949919.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

P30837: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Homo sapiens

32% id,
91% cov

AL1A7_RAT / P13601: Aldehyde dehydrogenase, cytosolic 1; ALDH class 1; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A7; Aldehyde dehydrogenase phenobarbital-inducible; EC 1.2.1.3 from Rattus norvegicus

32% id,
91% cov

AL1A1_RAT / P51647: Aldehyde dehydrogenase 1A1; 3-deoxyglucosone dehydrogenase; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; Retinal dehydrogenase 1; RALDH 1; RalDH1; EC 1.2.1.19; EC 1.2.1.28; EC 1.2.1.3; EC 1.2.1.36 from Rattus norvegicus

31% id,
93% cov

More...

H035_RS0114775 WP_026596657.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

A9KN57: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Lachnoclostridium phytofermentans

28% id,
82% cov

ADHE_CLOAB / P33744: Aldehyde-alcohol dehydrogenase; AAD; EC 1.1.1.1; EC 1.2.1.3 from Clostridium acetobutylicum

36% id,
52% cov

ADHE_STRP2 / A0A0H2ZM56: Aldehyde-alcohol dehydrogenase; EC 1.1.1.1; EC 1.2.1.3 from Streptococcus pneumoniae

32% id,
50% cov

More...

H035_RS0103980 WP_022947706.1: zinc-dependent alcohol dehydrogenase family protein
is similar to:
PaperBLAST

ADH_CUPNH / Q0KDL6: Alcohol dehydrogenase; EC 1.1.1.1; EC 1.1.1.4; EC 1.2.1.3 from Cupriavidus necator

29% id,
46% cov

H035_RS0115435 WP_022949863.1: zinc-dependent alcohol dehydrogenase family protein
is similar to:
PaperBLAST

ADH_CUPNH / Q0KDL6: Alcohol dehydrogenase; EC 1.1.1.1; EC 1.1.1.4; EC 1.2.1.3 from Cupriavidus necator

37% id,
23% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory