Curated BLAST for Genomes

 

Curated BLAST

Searching in Methylohalobius crimeensis 10Ki (GCF_000421465.1)

Found 85 curated entries in PaperBLAST's database that match '2.3.1.16' as complete word(s).

These curated entries have 64 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Methylohalobius crimeensis 10Ki, or try another query

H035_RS0116515 WP_022950067.1: acetyl-CoA C-acetyltransferase
is similar to:
PaperBLAST

fadA / Q5P5K2: 3-keto-acyl-CoA-thiolase (EC 2.3.1.16) from Aromatoleum aromaticum

59% id,
99% cov

THIM_HUMAN / P42765: 3-ketoacyl-CoA thiolase, mitochondrial; Acetyl-CoA acetyltransferase; Acetyl-CoA acyltransferase; Acyl-CoA hydrolase, mitochondrial; Beta-ketothiolase; Mitochondrial 3-oxoacyl-CoA thiolase; T1; EC 2.3.1.16; EC 2.3.1.9; EC 3.1.2.-; EC 3.1.2.1; EC 3.1.2.2 from Homo sapiens
ACAA2 / P42765: 3-ketoacyl-CoA thiolase, mitochondrial (EC 2.3.1.16) from Homo sapiens
P42765: acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Homo sapiens

39% id,
98% cov

pcaF / Q51956: subunit of β-ketoadipyl CoA thiolase (EC 2.3.1.174; EC 2.3.1.16) from Pseudomonas putida

38% id,
100% cov

More...

H035_RS0116520 WP_022950068.1: 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

32% id,
63% cov

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

43% id,
24% cov

H035_RS0102595 WP_026596187.1: beta-ketoacyl-ACP synthase
is similar to:
PaperBLAST

ECHB_HUMAN / P55084: Trifunctional enzyme subunit beta, mitochondrial; TP-beta; EC 2.3.1.155; EC 2.3.1.16 from Homo sapiens
HADHB / P55084: mitochondrial trifunctional enzyme β subunit (EC 2.3.1.16) from Homo sapiens

27% id,
31% cov

ECHB_MOUSE / Q99JY0: Trifunctional enzyme subunit beta, mitochondrial; TP-beta; EC 2.3.1.155; EC 2.3.1.16 from Mus musculus

34% id,
20% cov

ECHB_RAT / Q60587: Trifunctional enzyme subunit beta, mitochondrial; TP-beta; EC 2.3.1.155; EC 2.3.1.16 from Rattus norvegicus

33% id,
14% cov

fabF H035_RS0109615 WP_026596467.1: beta-ketoacyl-ACP synthase II
is similar to:
PaperBLAST

thl / P45359: acetoacetyl-CoA thiolase monomer (EC 2.3.1.16) from Clostridium acetobutylicum

27% id,
23% cov

H035_RS0109635 WP_022948771.1: beta-ketoacyl-ACP synthase III
is similar to:
PaperBLAST

Mpe_A3367 / A2SL81: acetyl-CoA C-acetyltransferase (EC 2.3.1.16) from Methylibium petroleiphilum

24% id,
23% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory