Curated BLAST for Genomes

 

Curated BLAST

Searching in Methylohalobius crimeensis 10Ki (GCF_000421465.1)

Found 38 curated entries in PaperBLAST's database that match '2.7.6.1' as complete word(s).

These curated entries have 30 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Methylohalobius crimeensis 10Ki, or try another query

H035_RS0103305 WP_200861559.1: ribose-phosphate diphosphokinase
is similar to:
PaperBLAST

KPRS_SALTY / P0A1V6: Ribose-phosphate pyrophosphokinase; RPPK; 5-phospho-D-ribosyl alpha-1-diphosphate synthase; Phosphoribosyl diphosphate synthase; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase; PRPPase; EC 2.7.6.1 from Salmonella typhimurium

61% id,
98% cov

KPRS_ECOLI / P0A717: Ribose-phosphate pyrophosphokinase; RPPK; 5-phospho-D-ribosyl alpha-1-diphosphate synthase; Phosphoribosyl diphosphate synthase; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase; PRPPase; EC 2.7.6.1 from Escherichia coli
DnaR / b1207: ribose-phosphate diphosphokinase (EC 2.7.6.1) from Escherichia coli
prs / P0A717: ribose-phosphate diphosphokinase (EC 2.7.6.1) from Escherichia coli
P0A719: ribose-phosphate diphosphokinase (EC 2.7.6.1) from Escherichia coli

61% id,
98% cov

E7EAU9: ribose-phosphate diphosphokinase (EC 2.7.6.1) from Bacillus amyloliquefaciens

54% id,
96% cov

More...

H035_RS0104205 WP_022947750.1: ribose-phosphate pyrophosphokinase
is similar to:
PaperBLAST

Q5SHU3: ribose-phosphate diphosphokinase (EC 2.7.6.1) from Thermus thermophilus

34% id,
100% cov

A0R3C8: ribose-phosphate diphosphokinase (EC 2.7.6.1) from Mycolicibacterium smegmatis

34% id,
96% cov

KPRS_ECOLI / P0A717: Ribose-phosphate pyrophosphokinase; RPPK; 5-phospho-D-ribosyl alpha-1-diphosphate synthase; Phosphoribosyl diphosphate synthase; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase; PRPPase; EC 2.7.6.1 from Escherichia coli
DnaR / b1207: ribose-phosphate diphosphokinase (EC 2.7.6.1) from Escherichia coli
prs / P0A717: ribose-phosphate diphosphokinase (EC 2.7.6.1) from Escherichia coli
P0A719: ribose-phosphate diphosphokinase (EC 2.7.6.1) from Escherichia coli

31% id,
100% cov

More...

purF H035_RS0108845 WP_022948628.1: amidophosphoribosyltransferase
is similar to:
PaperBLAST

KPRS_THEKO / O52958: Ribose-phosphate pyrophosphokinase; RPPK; 5-phospho-D-ribosyl alpha-1-diphosphate synthase; Phosphoribosyl diphosphate synthase; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase; PRPPase; EC 2.7.6.1 from Thermococcus kodakarensis

26% id,
46% cov

Q5SHU3: ribose-phosphate diphosphokinase (EC 2.7.6.1) from Thermus thermophilus

31% id,
28% cov

H035_RS0115910 WP_022949952.1: hypoxanthine-guanine phosphoribosyltransferase
is similar to:
PaperBLAST

A0R3C8: ribose-phosphate diphosphokinase (EC 2.7.6.1) from Mycolicibacterium smegmatis

39% id,
19% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory