Curated BLAST for Genomes

 

Curated BLAST

Searching in Methylohalobius crimeensis 10Ki (GCF_000421465.1)

Found 1 curated entries in PaperBLAST's database that match 'small subunit of acetolactate synthase' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Methylohalobius crimeensis 10Ki, or try another query

ilvN H035_RS0101180 WP_022947185.1: acetolactate synthase small subunit
is similar to:
PaperBLAST

AN4430: small subunit of acetolactate synthase from Emericella nidulans

43% id,
30% cov

AN4430: small subunit of acetolactate synthase from Emericella nidulans

25% id,
21% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

232432-233679 (frame +1) on NZ_ATXB01000001.1 Methylohalobius crimeensis 10Ki H035DRAFT_scaffold00001.1_C, whole genome shotgun sequence
is similar to:
PaperBLAST

AN4430: small subunit of acetolactate synthase from Emericella nidulans
Also see hits to annotated proteins above

35% id,
44% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory