Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfatiglans anilini DSM 4660 (GCF_000422285.1)

Found 116 curated entries in PaperBLAST's database that match '4.1.2.13' as complete word(s).

These curated entries have 92 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Desulfatiglans anilini DSM 4660, or try another query

H567_RS22300 WP_051184349.1: 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase
is similar to:
PaperBLAST

aroA' / Q57843: 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase monomer (EC 4.1.2.13; EC 2.2.1.10) from Methanocaldococcus jannaschii

56% id,
95% cov

ALF1_THETK / P58315: Fructose-bisphosphate aldolase class 1; Fructose-bisphosphate aldolase class I; FBP aldolase; FBPA; EC 4.1.2.13 from Thermoproteus tenax

35% id,
96% cov

ALF1_HALS3 / B0R3Y0: Fructose-bisphosphate aldolase class 1; Fructose-bisphosphate aldolase class I; FBP aldolase; EC 4.1.2.13 from Halobacterium salinarum

35% id,
95% cov

More...

H567_RS0100630 WP_028319906.1: 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase
is similar to:
PaperBLAST

aroA' / Q57843: 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase monomer (EC 4.1.2.13; EC 2.2.1.10) from Methanocaldococcus jannaschii

48% id,
96% cov

ALF1_THETK / P58315: Fructose-bisphosphate aldolase class 1; Fructose-bisphosphate aldolase class I; FBP aldolase; FBPA; EC 4.1.2.13 from Thermoproteus tenax

34% id,
94% cov

ALF1_HALS3 / B0R3Y0: Fructose-bisphosphate aldolase class 1; Fructose-bisphosphate aldolase class I; FBP aldolase; EC 4.1.2.13 from Halobacterium salinarum

30% id,
97% cov

More...

H567_RS0112650 WP_028321681.1: class II fructose-bisphosphate aldolase
is similar to:
PaperBLAST

I3EBM6: fructose-bisphosphate aldolase (EC 4.1.2.13) from Bacillus methanolicus

27% id,
81% cov

Q5HE75: fructose-bisphosphate aldolase (EC 4.1.2.13) from Staphylococcus aureus

27% id,
76% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

138409-139332 (frame -1) on NZ_AULM01000001.1 Desulfatiglans anilini DSM 4660 H567DRAFT_scaffold00001.1_C, whole genome shotgun sequence
is similar to:
PaperBLAST

aroA' / Q57843: 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase monomer (EC 4.1.2.13; EC 2.2.1.10) from Methanocaldococcus jannaschii
Also see hits to annotated proteins above

48% id,
98% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory