Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfatiglans anilini DSM 4660 (GCF_000422285.1)

Found 21 curated entries in PaperBLAST's database that match '4.2.3.1' as complete word(s).

These curated entries have 13 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Desulfatiglans anilini DSM 4660, or try another query

thrC H567_RS24955 WP_051184861.1: threonine synthase
is similar to:
PaperBLAST

Q8YFS0: threonine synthase (EC 4.2.3.1) from Brucella melitensis

34% id,
93% cov

THRC_CORGL / P23669: Threonine synthase; TS; EC 4.2.3.1 from Corynebacterium glutamicum

33% id,
95% cov

Q2SWH9: threonine synthase (EC 4.2.3.1) from Burkholderia thailandensis

32% id,
96% cov

More...

H567_RS0103335 WP_028320307.1: pyridoxal-phosphate dependent enzyme
is similar to:
PaperBLAST

THRC_MYCTU / P9WG59: Threonine synthase; TS; EC 4.2.3.1 from Mycobacterium tuberculosis
P9WG59: threonine synthase (EC 4.2.3.1) from Mycobacterium tuberculosis

30% id,
86% cov

P83823: threonine synthase (EC 4.2.3.1) from Thermus thermophilus
Q5SL02: threonine synthase (EC 4.2.3.1) from Thermus thermophilus

29% id,
83% cov

O66740: threonine synthase (EC 4.2.3.1) from Aquifex aeolicus

29% id,
83% cov

More...

H567_RS0118160 WP_028322479.1: threonine ammonia-lyase
is similar to:
PaperBLAST

P83823: threonine synthase (EC 4.2.3.1) from Thermus thermophilus
Q5SL02: threonine synthase (EC 4.2.3.1) from Thermus thermophilus

27% id,
92% cov

O66740: threonine synthase (EC 4.2.3.1) from Aquifex aeolicus

26% id,
91% cov

THRC_MYCTU / P9WG59: Threonine synthase; TS; EC 4.2.3.1 from Mycobacterium tuberculosis
P9WG59: threonine synthase (EC 4.2.3.1) from Mycobacterium tuberculosis

28% id,
81% cov

cysS H567_RS0109955 WP_028321288.1: cysteine--tRNA ligase
is similar to:
PaperBLAST

P83823: threonine synthase (EC 4.2.3.1) from Thermus thermophilus
Q5SL02: threonine synthase (EC 4.2.3.1) from Thermus thermophilus

24% id,
86% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory