Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfatiglans anilini DSM 4660 (GCF_000422285.1)

Found 13 curated entries in PaperBLAST's database that match '5.1.1.7' as complete word(s).

These curated entries have 8 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Desulfatiglans anilini DSM 4660, or try another query

dapF H567_RS0101835 WP_028320088.1: diaminopimelate epimerase
is similar to:
PaperBLAST

DAPF_THEMA / Q9X1L0: Diaminopimelate epimerase; DAP epimerase; Dpm epimerase; PLP-independent amino acid racemase; EC 5.1.1.7 from Thermotoga maritima

34% id,
95% cov

DAPF_HAEIN / P44859: Diaminopimelate epimerase; DAP epimerase; PLP-independent amino acid racemase; EC 5.1.1.7 from Haemophilus influenzae

31% id,
98% cov

DAPF_ARATH / Q9LFG2: Diaminopimelate epimerase, chloroplastic; DAP epimerase; EC 5.1.1.7 from Arabidopsis thaliana
Q9LFG2: diaminopimelate epimerase (EC 5.1.1.7) from Arabidopsis thaliana

35% id,
79% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory