Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfatiglans anilini DSM 4660 (GCF_000422285.1)

Found 8 curated entries in PaperBLAST's database that match '6.3.1.1' as complete word(s).

These curated entries have 5 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Desulfatiglans anilini DSM 4660, or try another query

asnA H567_RS0115785 WP_208598399.1: aspartate--ammonia ligase
is similar to:
PaperBLAST

ASNA_ECOLI / P00963: Aspartate--ammonia ligase; Asparagine synthetase A; EC 6.3.1.1 from Escherichia coli
AsnA / b3744: asparagine synthetase A (EC 6.3.1.1) from Escherichia coli
asnA / P00963: asparagine synthetase A (EC 6.3.1.1) from Escherichia coli

44% id,
96% cov

Q57WT9: aspartate-ammonia ligase (EC 6.3.1.1) from Trypanosoma brucei

40% id,
98% cov

asnB H567_RS0110675 WP_028321394.1: asparagine synthase B
is similar to:
PaperBLAST

AsnB / b0674: asparagine synthetase B (EC 6.3.5.4; EC 6.3.1.1; EC 3.5.1.38; EC 3.5.1.2) from Escherichia coli
asnB / P22106: asparagine synthetase B (EC 6.3.5.4; EC 6.3.1.1; EC 3.5.1.38) from Escherichia coli

38% id,
92% cov

H567_RS0122160 WP_028323051.1: asparagine synthase-related protein
is similar to:
PaperBLAST

AsnB / b0674: asparagine synthetase B (EC 6.3.5.4; EC 6.3.1.1; EC 3.5.1.38; EC 3.5.1.2) from Escherichia coli
asnB / P22106: asparagine synthetase B (EC 6.3.5.4; EC 6.3.1.1; EC 3.5.1.38) from Escherichia coli

30% id,
92% cov

asnS H567_RS0100320 WP_084516684.1: asparagine--tRNA ligase
is similar to:
PaperBLAST

Q9V228: asparagine-tRNA ligase (EC 6.1.1.22); aspartate-ammonia ligase (EC 6.3.1.1) from Pyrococcus abyssi

31% id,
57% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory