Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfatiglans anilini DSM 4660 (GCF_000422285.1)

Found 3 curated entries in PaperBLAST's database that match '6.3.2.60' as complete word(s).

These curated entries have 2 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Desulfatiglans anilini DSM 4660, or try another query

H567_RS0109075 WP_084517075.1: RimK family alpha-L-glutamate ligase
is similar to:
PaperBLAST

argX / Q4J8E7: glutamate--LysW ligase monomer (EC 6.3.2.60) from Sulfolobus acidocaldarius
Q4J8E7: glutamate---[amino group carrier protein] ligase (EC 6.3.2.60) from Sulfolobus acidocaldarius

28% id,
78% cov

carB H567_RS0110195 WP_028321325.1: carbamoyl-phosphate synthase large subunit
is similar to:
PaperBLAST

argX / Q4J8E7: glutamate--LysW ligase monomer (EC 6.3.2.60) from Sulfolobus acidocaldarius
Q4J8E7: glutamate---[amino group carrier protein] ligase (EC 6.3.2.60) from Sulfolobus acidocaldarius

28% id,
43% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory