Searching in Thermithiobacillus tepidarius DSM 3134 (GCF_000423825.1)
Found 19 curated entries in PaperBLAST's database that match '2.7.1.39' as complete word(s).
These curated entries have 13 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Thermithiobacillus tepidarius DSM 3134, or try another query
| G579_RS0109920 WP_028990062.1: homoserine kinase is similar to: | PaperBLAST |
KHSE_PSEAE / P29364: Homoserine kinase; HK; HSK; EC 2.7.1.39 from Pseudomonas aeruginosa | 45% id, 99% cov |
Ga0059261_3253: homoserine kinase (EC 2.7.1.39) from Sphingomonas koreensis | 41% id, 99% cov |
| aroK G579_RS0102650 WP_028988950.1: shikimate kinase AroK is similar to: | PaperBLAST |
thrB / B8DPL9: homoserine kinase (EC 2.7.1.39) from Desulfovibrio vulgaris | 37% id, 86% cov |
| G579_RS0104615 WP_028989244.1: gluconokinase is similar to: | PaperBLAST |
thrB / B8DPL9: homoserine kinase (EC 2.7.1.39) from Desulfovibrio vulgaris | 29% id, 81% cov |
| ispE G579_RS0100730 WP_028988662.1: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase is similar to: | PaperBLAST |
KHSE_ECOLI / P00547: Homoserine kinase; HK; HSK; EC 2.7.1.39 from Escherichia coli | 24% id, 71% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 13876-14544 (frame +1) on NZ_AUIS01000005.1 Thermithiobacillus tepidarius DSM 3134 G579DRAFT_scaffold00004.4_C, whole genome shotgun sequence is similar to: | PaperBLAST |
thrB / B8DPL9: homoserine kinase (EC 2.7.1.39) from Desulfovibrio vulgaris | 35% id, 94% cov |
| 183765-184568 (frame -2) on NZ_AUIS01000006.1 Thermithiobacillus tepidarius DSM 3134 G579DRAFT_scaffold00005.5_C, whole genome shotgun sequence is similar to: | PaperBLAST |
thrB / B8DPL9: homoserine kinase (EC 2.7.1.39) from Desulfovibrio vulgaris | 29% id, 83% cov |
Lawrence Berkeley National Laboratory