Curated BLAST for Genomes

 

Curated BLAST

Searching in Thermithiobacillus tepidarius DSM 3134 (GCF_000423825.1)

Found 15 curated entries in PaperBLAST's database that match '2.7.2.15' as complete word(s).

These curated entries have 11 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Thermithiobacillus tepidarius DSM 3134, or try another query

purT G579_RS0106670 WP_028989560.1: formate-dependent phosphoribosylglycinamide formyltransferase
is similar to:
PaperBLAST

PurT / b1849: phosphoribosylglycinamide formyltransferase 2 (EC 2.7.2.15; EC 2.7.2.1) from Escherichia coli
purT / P33221: phosphoribosylglycinamide formyltransferase 2 (EC 6.3.1.21; EC 2.7.2.15) from Escherichia coli

60% id,
99% cov

G579_RS17140 WP_038019545.1: acetate/propionate family kinase
is similar to:
PaperBLAST

PDUW_CITFR / B1VB81: Propionate kinase; EC 2.7.2.15 from Citrobacter freundii

41% id,
98% cov

PDUW_SALTY / P74879: Propionate kinase PduW; EC 2.7.2.15 from Salmonella typhimurium

40% id,
97% cov

TDCD_SALTY / O06961: Propionate kinase; EC 2.7.2.15 from Salmonella typhimurium
O06961: propionate kinase (EC 2.7.2.15) from Salmonella enterica

40% id,
95% cov

More...

G579_RS0111930 WP_028990366.1: 5-(carboxyamino)imidazole ribonucleotide synthase
is similar to:
PaperBLAST

PurT / b1849: phosphoribosylglycinamide formyltransferase 2 (EC 2.7.2.15; EC 2.7.2.1) from Escherichia coli
purT / P33221: phosphoribosylglycinamide formyltransferase 2 (EC 6.3.1.21; EC 2.7.2.15) from Escherichia coli

26% id,
98% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory