Curated BLAST for Genomes

 

Curated BLAST

Searching in Thermithiobacillus tepidarius DSM 3134 (GCF_000423825.1)

Found 116 curated entries in PaperBLAST's database that match '4.1.2.13' as complete word(s).

These curated entries have 92 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Thermithiobacillus tepidarius DSM 3134, or try another query

fba G579_RS0107525 WP_028989695.1: class II fructose-bisphosphate aldolase
is similar to:
PaperBLAST

Q602L6: fructose-bisphosphate aldolase (EC 4.1.2.13) from Methylococcus capsulatus

73% id,
100% cov

ALF_XANFL / Q56815: Fructose-bisphosphate aldolase; FBP aldolase; FBPA; Fructose-1,6-bisphosphate aldolase; EC 4.1.2.13 from Xanthobacter flavus

74% id,
99% cov

A0Q7I9: fructose-bisphosphate aldolase (EC 4.1.2.13) from Francisella tularensis

72% id,
100% cov

More...

G579_RS0113435 WP_028990577.1: class I fructose-bisphosphate aldolase
is similar to:
PaperBLAST

Q8L207: fructose-bisphosphate aldolase (EC 4.1.2.13) from Bartonella henselae

55% id,
99% cov

ALF_DROME / P07764: Fructose-bisphosphate aldolase; EC 4.1.2.13 from Drosophila melanogaster

55% id,
92% cov

ALFC8_ARATH / Q9LF98: Fructose-bisphosphate aldolase 8, cytosolic; AtFBA8; Cytosolic aldolase 1; cAld1; EC 4.1.2.13 from Arabidopsis thaliana

54% id,
92% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory