Curated BLAST for Genomes

 

Curated BLAST

Searching in Thermithiobacillus tepidarius DSM 3134 (GCF_000423825.1)

Found 1 curated entries in PaperBLAST's database that match 'acetohydroxyacid synthase subunit B' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Thermithiobacillus tepidarius DSM 3134, or try another query

G579_RS0113910 WP_051181781.1: acetolactate synthase 3 large subunit
is similar to:
PaperBLAST

ilvB / Q0KCU4: acetohydroxyacid synthase subunit B (EC 2.2.1.6) from Cupriavidus necator

69% id,
96% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

147714-149546 (frame +3) on NZ_KE384096.1 Thermithiobacillus tepidarius DSM 3134 G579DRAFT_scaffold00001.1, whole genome shotgun sequence
is similar to:
PaperBLAST

ilvB / Q0KCU4: acetohydroxyacid synthase subunit B (EC 2.2.1.6) from Cupriavidus necator
Also see hits to annotated proteins above

68% id,
98% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory