Curated BLAST for Genomes

 

Curated BLAST

Searching in Maridesulfovibrio zosterae DSM 11974 (GCF_000425265.1)

Found 35 curated entries in PaperBLAST's database that match '1.1.1.86' as complete word(s).

These curated entries have 25 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Maridesulfovibrio zosterae DSM 11974, or try another query

ilvC H589_RS0113600 WP_027722535.1: ketol-acid reductoisomerase
is similar to:
PaperBLAST

ILVC_ALIAD / C8WR67: Ketol-acid reductoisomerase (NADP(+)); KARI; Acetohydroxy-acid isomeroreductase; AHIR; Alpha-keto-beta-hydroxylacyl reductoisomerase; Ketol-acid reductoisomerase type 1; Ketol-acid reductoisomerase type I; EC 1.1.1.86 from Alicyclobacillus acidocaldarius
C8WR67: ketol-acid reductoisomerase (NAD+) (EC 1.1.1.382); ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Alicyclobacillus acidocaldarius

66% id,
95% cov

D3PT81: ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Meiothermus ruber

64% id,
97% cov

ilvC / Q0KCU2: acetohydroxyacid isomeroreductase (EC 1.1.1.86) from Cupriavidus necator

62% id,
97% cov

More...

ilvC H589_RS0116415 WP_027723029.1: ketol-acid reductoisomerase
is similar to:
PaperBLAST

A6UW80: ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Methanococcus aeolicus

42% id,
98% cov

D3PT81: ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Meiothermus ruber

43% id,
94% cov

Q64BR7: ketol-acid reductoisomerase (NAD+) (EC 1.1.1.382); ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from uncultured archaeon

40% id,
99% cov

More...

H589_RS0102830 WP_027720630.1: NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

ILVC_MYCTU / P9WKJ7: Ketol-acid reductoisomerase (NADP(+)); KARI; Acetohydroxy-acid isomeroreductase; AHIR; Alpha-keto-beta-hydroxylacyl reductoisomerase; Ketol-acid reductoisomerase type 1; Ketol-acid reductoisomerase type I; EC 1.1.1.86 from Mycobacterium tuberculosis
A5U713: ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Mycobacterium tuberculosis
P9WKJ7: ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Mycobacterium tuberculosis

29% id,
26% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory