Curated BLAST for Genomes

 

Curated BLAST

Searching in Maridesulfovibrio zosterae DSM 11974 (GCF_000425265.1)

Found 35 curated entries in PaperBLAST's database that match '1.1.1.9' as complete word(s).

These curated entries have 30 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Maridesulfovibrio zosterae DSM 11974, or try another query

H589_RS0109350 WP_027721773.1: 2,3-butanediol dehydrogenase
is similar to:
PaperBLAST

DHSO_BACSU / Q06004: Sorbitol dehydrogenase; SDH; Glucitol dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Bacillus subtilis
gutB / Q06004: glucitol dehydrogenase monomer (EC 1.1.1.9; EC 1.1.1.14) from Bacillus subtilis

34% id,
99% cov

eltD / A0QXD8: erythritol/L-threitol dehydrogenase (EC 1.1.1.56; EC 1.1.1.12; EC 1.1.1.9) from Mycolicibacterium smegmatis

32% id,
99% cov

S6BFC0: D-xylulose reductase (EC 1.1.1.9) from Rhizomucor pusillus

33% id,
95% cov

More...

fabG H589_RS0116710 WP_027723082.1: 3-oxoacyl-ACP reductase FabG
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

32% id,
98% cov

tdh H589_RS0108180 WP_156891687.1: L-threonine 3-dehydrogenase
is similar to:
PaperBLAST

DHSO_BACSU / Q06004: Sorbitol dehydrogenase; SDH; Glucitol dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Bacillus subtilis
gutB / Q06004: glucitol dehydrogenase monomer (EC 1.1.1.9; EC 1.1.1.14) from Bacillus subtilis

32% id,
93% cov

S6BFC0: D-xylulose reductase (EC 1.1.1.9) from Rhizomucor pusillus

30% id,
97% cov

G3AIB3: D-xylulose reductase (EC 1.1.1.9) from Spathaspora passalidarum

30% id,
98% cov

More...

fabG H589_RS0117160 WP_027723168.1: 3-oxoacyl-[acyl-carrier-protein] reductase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

30% id,
97% cov

H589_RS0110660 WP_027721995.1: zinc-binding dehydrogenase
is similar to:
PaperBLAST

Dshi_0551: D-xylulose reductase (EC 1.1.1.9) from Dinoroseobacter shibae

26% id,
94% cov

S6BFC0: D-xylulose reductase (EC 1.1.1.9) from Rhizomucor pusillus

26% id,
95% cov

G3AIP8: D-xylulose reductase (EC 1.1.1.9) from Spathaspora passalidarum

25% id,
96% cov

More...

H589_RS0110265 WP_027721924.1: SDR family oxidoreductase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

24% id,
97% cov

H589_RS0118330 WP_027723375.1: FAD-dependent oxidoreductase
is similar to:
PaperBLAST

S6BFC0: D-xylulose reductase (EC 1.1.1.9) from Rhizomucor pusillus

28% id,
29% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory