Curated BLAST for Genomes

 

Curated BLAST

Searching in Maridesulfovibrio zosterae DSM 11974 (GCF_000425265.1)

Found 20 curated entries in PaperBLAST's database that match '2.6.1.39' as complete word(s).

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 13 relevant proteins in Maridesulfovibrio zosterae DSM 11974, or try another query

gabT H589_RS0118185 WP_027723350.1: 4-aminobutyrate--2-oxoglutarate transaminase
is similar to:
PaperBLAST

2AAAT_PSEPK / Q88FI7: 2-aminoadipate transaminase; 2-aminoadipate aminotransferase; L-2AA aminotransferase; EC 2.6.1.39 from Pseudomonas putida
Q88FI7: 4-aminobutyrate aminotransferase (EC 2.6.1.39) from Pseudomonas putida
PP_4108: 2-aminoadipate transaminase (EC 2.6.1.39) from Pseudomonas putida

41% id,
99% cov

H589_RS0105035 WP_027721027.1: PLP-dependent aminotransferase family protein
is similar to:
PaperBLAST

LYSN_THET2 / Q72LL6: 2-aminoadipate transaminase; 2-aminoadipate aminotransferase; Alpha-aminoadipate aminotransferase; AAA-AT; AadAT; EC 2.6.1.39 from Thermus thermophilus
Q72LL6: 2-aminoadipate transaminase (EC 2.6.1.39) from Thermus thermophilus

42% id,
97% cov

lysN / Q5SL82: L-2-aminoadipate aminotransferase monomer (EC 2.6.1.39) from Thermus thermophilus

42% id,
97% cov

AADAT_HUMAN / Q8N5Z0: Kynurenine/alpha-aminoadipate aminotransferase, mitochondrial; KAT/AadAT; 2-aminoadipate aminotransferase; 2-aminoadipate transaminase; Alpha-aminoadipate aminotransferase; AadAT; Glycine transaminase AADAT; Kynurenine aminotransferase II; Kynurenine--glyoxylate transaminase AADAT; Kynurenine--oxoglutarate aminotransferase II; Kynurenine--oxoglutarate transaminase 2; Kynurenine--oxoglutarate transaminase II; Methionine--glyoxylate transaminase AADAT; EC 2.6.1.39; EC 2.6.1.4; EC 2.6.1.63; EC 2.6.1.7; EC 2.6.1.73 from Homo sapiens
AADAT / Q8N5Z0: Kynurenine/alpha-aminoadipate aminotransferase, mitochondrial (EC 2.6.1.7; EC 2.6.1.39) from Homo sapiens
Q8N5Z0: 2-aminoadipate transaminase (EC 2.6.1.39); kynurenine-oxoglutarate transaminase (EC 2.6.1.7) from Homo sapiens

29% id,
93% cov

More...

H589_RS0102885 WP_027720641.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

AAT_RHIME / P58350: Aspartate aminotransferase; AAT; AspAT; Putative 2-aminoadipate transaminase; Transaminase A; EC 2.6.1.1; EC 2.6.1.39 from Rhizobium meliloti
SMc04386: 2-aminoadipate:2-oxoglutarate aminotransferase (EC 2.6.1.39) from Sinorhizobium meliloti

35% id,
95% cov

H589_RS0113085 WP_027722435.1: aspartate aminotransferase family protein
is similar to:
PaperBLAST

2AAAT_PSEPK / Q88FI7: 2-aminoadipate transaminase; 2-aminoadipate aminotransferase; L-2AA aminotransferase; EC 2.6.1.39 from Pseudomonas putida
Q88FI7: 4-aminobutyrate aminotransferase (EC 2.6.1.39) from Pseudomonas putida
PP_4108: 2-aminoadipate transaminase (EC 2.6.1.39) from Pseudomonas putida

33% id,
99% cov

rocD H589_RS0118050 WP_027723325.1: ornithine--oxo-acid transaminase
is similar to:
PaperBLAST

2AAAT_PSEPK / Q88FI7: 2-aminoadipate transaminase; 2-aminoadipate aminotransferase; L-2AA aminotransferase; EC 2.6.1.39 from Pseudomonas putida
Q88FI7: 4-aminobutyrate aminotransferase (EC 2.6.1.39) from Pseudomonas putida
PP_4108: 2-aminoadipate transaminase (EC 2.6.1.39) from Pseudomonas putida

32% id,
96% cov

H589_RS0107920 WP_027721528.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

AAT_RHIME / P58350: Aspartate aminotransferase; AAT; AspAT; Putative 2-aminoadipate transaminase; Transaminase A; EC 2.6.1.1; EC 2.6.1.39 from Rhizobium meliloti
SMc04386: 2-aminoadipate:2-oxoglutarate aminotransferase (EC 2.6.1.39) from Sinorhizobium meliloti

30% id,
95% cov

H589_RS0100395 WP_027720192.1: aspartate aminotransferase family protein
is similar to:
PaperBLAST

2AAAT_PSEPK / Q88FI7: 2-aminoadipate transaminase; 2-aminoadipate aminotransferase; L-2AA aminotransferase; EC 2.6.1.39 from Pseudomonas putida
Q88FI7: 4-aminobutyrate aminotransferase (EC 2.6.1.39) from Pseudomonas putida
PP_4108: 2-aminoadipate transaminase (EC 2.6.1.39) from Pseudomonas putida

30% id,
95% cov

H589_RS0104130 WP_027720863.1: aminotransferase class III-fold pyridoxal phosphate-dependent enzyme
is similar to:
PaperBLAST

2AAAT_PSEPK / Q88FI7: 2-aminoadipate transaminase; 2-aminoadipate aminotransferase; L-2AA aminotransferase; EC 2.6.1.39 from Pseudomonas putida
Q88FI7: 4-aminobutyrate aminotransferase (EC 2.6.1.39) from Pseudomonas putida
PP_4108: 2-aminoadipate transaminase (EC 2.6.1.39) from Pseudomonas putida

28% id,
99% cov

H589_RS0110075 WP_027721890.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

AAT_RHIME / P58350: Aspartate aminotransferase; AAT; AspAT; Putative 2-aminoadipate transaminase; Transaminase A; EC 2.6.1.1; EC 2.6.1.39 from Rhizobium meliloti
SMc04386: 2-aminoadipate:2-oxoglutarate aminotransferase (EC 2.6.1.39) from Sinorhizobium meliloti

29% id,
95% cov

hemL H589_RS0117650 WP_027723260.1: glutamate-1-semialdehyde 2,1-aminomutase
is similar to:
PaperBLAST

2AAAT_PSEPK / Q88FI7: 2-aminoadipate transaminase; 2-aminoadipate aminotransferase; L-2AA aminotransferase; EC 2.6.1.39 from Pseudomonas putida
Q88FI7: 4-aminobutyrate aminotransferase (EC 2.6.1.39) from Pseudomonas putida
PP_4108: 2-aminoadipate transaminase (EC 2.6.1.39) from Pseudomonas putida

29% id,
88% cov

H589_RS0118570 WP_027723416.1: PLP-dependent aminotransferase family protein
is similar to:
PaperBLAST

LYSN_THET2 / Q72LL6: 2-aminoadipate transaminase; 2-aminoadipate aminotransferase; Alpha-aminoadipate aminotransferase; AAA-AT; AadAT; EC 2.6.1.39 from Thermus thermophilus
Q72LL6: 2-aminoadipate transaminase (EC 2.6.1.39) from Thermus thermophilus

28% id,
94% cov

lysN / Q5SL82: L-2-aminoadipate aminotransferase monomer (EC 2.6.1.39) from Thermus thermophilus

28% id,
94% cov

H589_RS0113385 WP_027722492.1: aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
is similar to:
PaperBLAST

AAT_RHIME / P58350: Aspartate aminotransferase; AAT; AspAT; Putative 2-aminoadipate transaminase; Transaminase A; EC 2.6.1.1; EC 2.6.1.39 from Rhizobium meliloti
SMc04386: 2-aminoadipate:2-oxoglutarate aminotransferase (EC 2.6.1.39) from Sinorhizobium meliloti

28% id,
92% cov

H589_RS0102840 WP_027720632.1: PLP-dependent aminotransferase family protein
is similar to:
PaperBLAST

LYSN_THET2 / Q72LL6: 2-aminoadipate transaminase; 2-aminoadipate aminotransferase; Alpha-aminoadipate aminotransferase; AAA-AT; AadAT; EC 2.6.1.39 from Thermus thermophilus
Q72LL6: 2-aminoadipate transaminase (EC 2.6.1.39) from Thermus thermophilus

27% id,
79% cov

lysN / Q5SL82: L-2-aminoadipate aminotransferase monomer (EC 2.6.1.39) from Thermus thermophilus

27% id,
79% cov

AADAT_MOUSE / Q9WVM8: Kynurenine/alpha-aminoadipate aminotransferase, mitochondrial; KAT/AadAT; 2-aminoadipate aminotransferase; 2-aminoadipate transaminase; Alpha-aminoadipate aminotransferase; AadAT; Glycine transaminase AADAT; Kynurenine aminotransferase II; Kynurenine--glyoxylate transaminase AADAT; Kynurenine--oxoglutarate aminotransferase II; Kynurenine--oxoglutarate transaminase 2; Kynurenine--oxoglutarate transaminase II; Methionine--glyoxylate transaminase AADAT; EC 2.6.1.39; EC 2.6.1.4; EC 2.6.1.63; EC 2.6.1.7; EC 2.6.1.73 from Mus musculus
Q9WVM8: 2-aminoadipate transaminase (EC 2.6.1.39); kynurenine-oxoglutarate transaminase (EC 2.6.1.7) from Mus musculus

23% id,
88% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 14 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

476306-477499 (frame -1) on NZ_AUDC01000010.1 Maridesulfovibrio zosterae DSM 11974 H589DRAFT_scaffold00002.2_C, whole genome shotgun sequence
is similar to:
PaperBLAST

AAT_RHIME / P58350: Aspartate aminotransferase; AAT; AspAT; Putative 2-aminoadipate transaminase; Transaminase A; EC 2.6.1.1; EC 2.6.1.39 from Rhizobium meliloti
SMc04386: 2-aminoadipate:2-oxoglutarate aminotransferase (EC 2.6.1.39) from Sinorhizobium meliloti
Also see hits to annotated proteins above

35% id,
97% cov

199659-200858 (frame +3) on NZ_AUDC01000015.1 Maridesulfovibrio zosterae DSM 11974 H589DRAFT_scaffold00006.6_C, whole genome shotgun sequence
is similar to:
PaperBLAST

AAT_RHIME / P58350: Aspartate aminotransferase; AAT; AspAT; Putative 2-aminoadipate transaminase; Transaminase A; EC 2.6.1.1; EC 2.6.1.39 from Rhizobium meliloti
SMc04386: 2-aminoadipate:2-oxoglutarate aminotransferase (EC 2.6.1.39) from Sinorhizobium meliloti
Also see hits to annotated proteins above

29% id,
98% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory