Curated BLAST for Genomes

 

Curated BLAST

Searching in Maridesulfovibrio zosterae DSM 11974 (GCF_000425265.1)

Found 31 curated entries in PaperBLAST's database that match '2.7.1.15' as complete word(s).

These curated entries have 24 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Maridesulfovibrio zosterae DSM 11974, or try another query

pfkB H589_RS0115580 WP_027722882.1: 1-phosphofructokinase
is similar to:
PaperBLAST

AO353_20835: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens

26% id,
98% cov

SMc01103: Ribokinase (EC 2.7.1.15) from Sinorhizobium meliloti

28% id,
92% cov

BT2804: ribokinase (EC 2.7.1.15) from Bacteroides thetaiotaomicron

25% id,
98% cov

More...

H589_RS0112880 WP_027722398.1: carbohydrate kinase family protein
is similar to:
PaperBLAST

RBSK_SCHPO / O60116: Ribokinase; RK; EC 2.7.1.15 from Schizosaccharomyces pombe

26% id,
84% cov

BPHYT_RS25805: deoxyribose kinase (EC 2.7.1.15) from Burkholderia phytofirmans

24% id,
80% cov

H281DRAFT_01116: deoxyribose kinase (EC 2.7.1.15) from Paraburkholderia bryophila

23% id,
79% cov

H589_RS0116170 WP_027722988.1: PfkB family carbohydrate kinase
is similar to:
PaperBLAST

SMc01103: Ribokinase (EC 2.7.1.15) from Sinorhizobium meliloti

23% id,
87% cov

RBSK_ARATH / A1A6H3: Ribokinase; AtRBSK; RK; EC 2.7.1.15 from Arabidopsis thaliana
RBSK / A1A6H3: ribokinase (EC 2.7.1.15) from Arabidopsis thaliana
A1A6H3: ribokinase (EC 2.7.1.15) from Arabidopsis thaliana

26% id,
71% cov

RBSK_YEAST / P25332: Ribokinase; RK; EC 2.7.1.15 from Saccharomyces cerevisiae

21% id,
77% cov

More...

rfaE1 H589_RS0102595 WP_027720587.1: D-glycero-beta-D-manno-heptose-7-phosphate kinase
is similar to:
PaperBLAST

RBSK_SCHPO / O60116: Ribokinase; RK; EC 2.7.1.15 from Schizosaccharomyces pombe

28% id,
47% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory