Curated BLAST for Genomes

 

Curated BLAST

Searching in Maridesulfovibrio zosterae DSM 11974 (GCF_000425265.1)

Found 13 curated entries in PaperBLAST's database that match '6.2.1.30' as complete word(s).

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 11 relevant proteins in Maridesulfovibrio zosterae DSM 11974, or try another query

H589_RS0114110 WP_027722629.1: phenylacetate--CoA ligase
is similar to:
PaperBLAST

PAAK_THET2 / Q72K16: Phenylacetate-coenzyme A ligase; Phenylacetyl-CoA ligase; PA-CoA ligase; EC 6.2.1.30 from Thermus thermophilus
Q72K16: phenylacetate-CoA ligase (EC 6.2.1.30) from Thermus thermophilus

55% id,
100% cov

PAAK_ECOLI / P76085: Phenylacetate-coenzyme A ligase; Phenylacetyl-CoA ligase; PA-CoA ligase; EC 6.2.1.30 from Escherichia coli
PaaK / b1398: phenylacetate-CoA ligase (EC 6.2.1.30) from Escherichia coli

56% id,
97% cov

B4E7B5: phenylacetate-CoA ligase (EC 6.2.1.30) from Burkholderia cenocepacia

55% id,
97% cov

More...

H589_RS0115135 WP_027722808.1: phenylacetate--CoA ligase
is similar to:
PaperBLAST

B4E7B5: phenylacetate-CoA ligase (EC 6.2.1.30) from Burkholderia cenocepacia

47% id,
97% cov

B4EL89: phenylacetate-CoA ligase (EC 6.2.1.30) from Burkholderia cenocepacia

46% id,
97% cov

PAAK_AROEV / Q9L9C1: Phenylacetate-coenzyme A ligase; Phenylacetyl-CoA ligase; PA-CoA ligase; EC 6.2.1.30 from Aromatoleum evansii
paaK / Q9L9C1: phenylacetate-CoA ligase (aerobic) (EC 6.2.1.30) from Aromatoleum evansii

45% id,
98% cov

More...

H589_RS0104800 WP_027720983.1: phenylacetate--CoA ligase
is similar to:
PaperBLAST

B4E7B5: phenylacetate-CoA ligase (EC 6.2.1.30) from Burkholderia cenocepacia

42% id,
98% cov

B4EL89: phenylacetate-CoA ligase (EC 6.2.1.30) from Burkholderia cenocepacia

42% id,
97% cov

PAAK_AROEV / Q9L9C1: Phenylacetate-coenzyme A ligase; Phenylacetyl-CoA ligase; PA-CoA ligase; EC 6.2.1.30 from Aromatoleum evansii
paaK / Q9L9C1: phenylacetate-CoA ligase (aerobic) (EC 6.2.1.30) from Aromatoleum evansii

41% id,
97% cov

More...

H589_RS0102205 WP_027720514.1: AMP-binding protein
is similar to:
PaperBLAST

PAAK_THET2 / Q72K16: Phenylacetate-coenzyme A ligase; Phenylacetyl-CoA ligase; PA-CoA ligase; EC 6.2.1.30 from Thermus thermophilus
Q72K16: phenylacetate-CoA ligase (EC 6.2.1.30) from Thermus thermophilus

32% id,
98% cov

B4EL89: phenylacetate-CoA ligase (EC 6.2.1.30) from Burkholderia cenocepacia

27% id,
97% cov

B4E7B5: phenylacetate-CoA ligase (EC 6.2.1.30) from Burkholderia cenocepacia

30% id,
85% cov

More...

H589_RS0117610 WP_027723252.1: long-chain fatty acid--CoA ligase
is similar to:
PaperBLAST

D3GE78: phenylacetate-CoA ligase (EC 6.2.1.30) from Penicillium chrysogenum

30% id,
94% cov

phl / O74725: phenylacetyl-CoA ligase (EC 6.2.1.30) from Penicillium chrysogenum
O74725: medium-chain acyl-CoA ligase (EC 6.2.1.2); phenylacetate-CoA ligase (EC 6.2.1.30) from Penicillium chrysogenum

28% id,
97% cov

A7KUK6: phenylacetate-CoA ligase (EC 6.2.1.30) from Penicillium chrysogenum

29% id,
86% cov

H589_RS0101900 WP_027720454.1: AMP-binding protein
is similar to:
PaperBLAST

A7KUK6: phenylacetate-CoA ligase (EC 6.2.1.30) from Penicillium chrysogenum

29% id,
96% cov

D3GE78: phenylacetate-CoA ligase (EC 6.2.1.30) from Penicillium chrysogenum

28% id,
68% cov

H589_RS0101365 WP_035074658.1: AMP-binding protein
is similar to:
PaperBLAST

PAAK_AROEV / Q9L9C1: Phenylacetate-coenzyme A ligase; Phenylacetyl-CoA ligase; PA-CoA ligase; EC 6.2.1.30 from Aromatoleum evansii
paaK / Q9L9C1: phenylacetate-CoA ligase (aerobic) (EC 6.2.1.30) from Aromatoleum evansii

26% id,
92% cov

B4EL89: phenylacetate-CoA ligase (EC 6.2.1.30) from Burkholderia cenocepacia

27% id,
89% cov

PAAK_ECOLI / P76085: Phenylacetate-coenzyme A ligase; Phenylacetyl-CoA ligase; PA-CoA ligase; EC 6.2.1.30 from Escherichia coli
PaaK / b1398: phenylacetate-CoA ligase (EC 6.2.1.30) from Escherichia coli

26% id,
90% cov

More...

acs H589_RS0102105 WP_027720495.1: acetate--CoA ligase
is similar to:
PaperBLAST

A7KUK6: phenylacetate-CoA ligase (EC 6.2.1.30) from Penicillium chrysogenum

25% id,
90% cov

acs H589_RS0105060 WP_027721031.1: acetate--CoA ligase
is similar to:
PaperBLAST

D3GE78: phenylacetate-CoA ligase (EC 6.2.1.30) from Penicillium chrysogenum

25% id,
88% cov

phl / O74725: phenylacetyl-CoA ligase (EC 6.2.1.30) from Penicillium chrysogenum
O74725: medium-chain acyl-CoA ligase (EC 6.2.1.2); phenylacetate-CoA ligase (EC 6.2.1.30) from Penicillium chrysogenum

27% id,
47% cov

acs H589_RS0103275 WP_027720711.1: acetate--CoA ligase
is similar to:
PaperBLAST

phl / O74725: phenylacetyl-CoA ligase (EC 6.2.1.30) from Penicillium chrysogenum
O74725: medium-chain acyl-CoA ligase (EC 6.2.1.2); phenylacetate-CoA ligase (EC 6.2.1.30) from Penicillium chrysogenum

27% id,
62% cov

D3GE78: phenylacetate-CoA ligase (EC 6.2.1.30) from Penicillium chrysogenum

23% id,
69% cov

H589_RS0101890 WP_027720452.1: AMP-binding protein
is similar to:
PaperBLAST

A7KUK6: phenylacetate-CoA ligase (EC 6.2.1.30) from Penicillium chrysogenum

26% id,
48% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 11 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory