Curated BLAST for Genomes

 

Curated BLAST

Searching in Sedimenticola selenatireducens DSM 17993 (GCF_000428045.1)

Found 35 curated entries in PaperBLAST's database that match '1.1.1.86' as complete word(s).

These curated entries have 25 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Sedimenticola selenatireducens DSM 17993, or try another query

ilvC A3GO_RS0120860 WP_029135046.1: ketol-acid reductoisomerase
is similar to:
PaperBLAST

ILVC_AZOVD / C1DFH7: Ketol-acid reductoisomerase (NADP(+)); KARI; Acetohydroxy-acid isomeroreductase; AHIR; Alpha-keto-beta-hydroxylacyl reductoisomerase; Ketol-acid reductoisomerase type 1; Ketol-acid reductoisomerase type I; EC 1.1.1.86 from Azotobacter vinelandii
C1DFH7: ketol-acid reductoisomerase [NAD(P)+] (EC 1.1.1.383); ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Azotobacter vinelandii

81% id,
100% cov

ILVC_PSEAE / Q9HVA2: Ketol-acid reductoisomerase (NADP(+)); KARI; Acetohydroxy-acid isomeroreductase; AHIR; Alpha-keto-beta-hydroxylacyl reductoisomerase; Ketol-acid reductoisomerase type 1; Ketol-acid reductoisomerase type I; EC 1.1.1.86 from Pseudomonas aeruginosa

81% id,
100% cov

ilvC / Q0KCU2: acetohydroxyacid isomeroreductase (EC 1.1.1.86) from Cupriavidus necator

69% id,
100% cov

More...

A3GO_RS0112630 WP_029133701.1: NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

ILVC_MYCTU / P9WKJ7: Ketol-acid reductoisomerase (NADP(+)); KARI; Acetohydroxy-acid isomeroreductase; AHIR; Alpha-keto-beta-hydroxylacyl reductoisomerase; Ketol-acid reductoisomerase type 1; Ketol-acid reductoisomerase type I; EC 1.1.1.86 from Mycobacterium tuberculosis
A5U713: ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Mycobacterium tuberculosis
P9WKJ7: ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Mycobacterium tuberculosis

28% id,
22% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory