Curated BLAST for Genomes

 

Curated BLAST

Searching in Sedimenticola selenatireducens DSM 17993 (GCF_000428045.1)

Found 9 curated entries in PaperBLAST's database that match '1.2.1.18' as complete word(s).

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 9 relevant proteins in Sedimenticola selenatireducens DSM 17993, or try another query

A3GO_RS0108930 WP_029133105.1: CoA-acylating methylmalonate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

dddC / C8YX90: malonate-semialdehyde dehydrogenase (acetylating) (EC 1.2.1.18) from Halomonas sp.

60% id,
99% cov

AO356_23175: malonate-semialdehyde dehydrogenase (acetylating) (EC 1.2.1.18) from Pseudomonas fluorescens

60% id,
99% cov

Pf6N2E2_515: malonate-semialdehyde dehydrogenase (acetylating) (EC 1.2.1.18) from Pseudomonas fluorescens

59% id,
99% cov

More...

A3GO_RS0120300 WP_029134950.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

mmsA / P42412: (methyl)malonate-semialdehyde dehydrogenase monomer (EC 1.2.1.27; EC 1.2.1.18) from Bacillus subtilis

33% id,
98% cov

SMc00781: malonate-semialdehyde dehydrogenase (acetylating) (EC 1.2.1.18) from Sinorhizobium meliloti

33% id,
96% cov

PS417_10925: malonate-semialdehyde dehydrogenase (acetylating) (EC 1.2.1.18) from Pseudomonas simiae

32% id,
97% cov

More...

A3GO_RS0117140 WP_029134446.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

AO356_23175: malonate-semialdehyde dehydrogenase (acetylating) (EC 1.2.1.18) from Pseudomonas fluorescens

33% id,
96% cov

Pf6N2E2_515: malonate-semialdehyde dehydrogenase (acetylating) (EC 1.2.1.18) from Pseudomonas fluorescens

33% id,
96% cov

mmsA / P42412: (methyl)malonate-semialdehyde dehydrogenase monomer (EC 1.2.1.27; EC 1.2.1.18) from Bacillus subtilis

31% id,
98% cov

More...

A3GO_RS0110905 WP_029133426.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

mmsA / P42412: (methyl)malonate-semialdehyde dehydrogenase monomer (EC 1.2.1.27; EC 1.2.1.18) from Bacillus subtilis

32% id,
93% cov

AO356_23175: malonate-semialdehyde dehydrogenase (acetylating) (EC 1.2.1.18) from Pseudomonas fluorescens

32% id,
93% cov

Pf6N2E2_515: malonate-semialdehyde dehydrogenase (acetylating) (EC 1.2.1.18) from Pseudomonas fluorescens

32% id,
91% cov

More...

A3GO_RS0114560 WP_029134020.1: NAD-dependent succinate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

mmsA / P42412: (methyl)malonate-semialdehyde dehydrogenase monomer (EC 1.2.1.27; EC 1.2.1.18) from Bacillus subtilis

31% id,
93% cov

AO356_23175: malonate-semialdehyde dehydrogenase (acetylating) (EC 1.2.1.18) from Pseudomonas fluorescens

31% id,
93% cov

Pf6N2E2_515: malonate-semialdehyde dehydrogenase (acetylating) (EC 1.2.1.18) from Pseudomonas fluorescens

31% id,
93% cov

More...

gabD A3GO_RS0115130 WP_084610126.1: NADP-dependent succinate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

AO356_23175: malonate-semialdehyde dehydrogenase (acetylating) (EC 1.2.1.18) from Pseudomonas fluorescens

31% id,
94% cov

Pf6N2E2_515: malonate-semialdehyde dehydrogenase (acetylating) (EC 1.2.1.18) from Pseudomonas fluorescens

30% id,
94% cov

mmsA / P42412: (methyl)malonate-semialdehyde dehydrogenase monomer (EC 1.2.1.27; EC 1.2.1.18) from Bacillus subtilis

29% id,
96% cov

More...

A3GO_RS0105360 WP_245621674.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

AO356_23175: malonate-semialdehyde dehydrogenase (acetylating) (EC 1.2.1.18) from Pseudomonas fluorescens

29% id,
96% cov

PS417_10925: malonate-semialdehyde dehydrogenase (acetylating) (EC 1.2.1.18) from Pseudomonas simiae

28% id,
95% cov

Pf6N2E2_515: malonate-semialdehyde dehydrogenase (acetylating) (EC 1.2.1.18) from Pseudomonas fluorescens

28% id,
95% cov

More...

A3GO_RS0115615 WP_029134199.1: NAD-dependent succinate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

PS417_10925: malonate-semialdehyde dehydrogenase (acetylating) (EC 1.2.1.18) from Pseudomonas simiae

30% id,
91% cov

AO356_23175: malonate-semialdehyde dehydrogenase (acetylating) (EC 1.2.1.18) from Pseudomonas fluorescens

28% id,
92% cov

Pf6N2E2_515: malonate-semialdehyde dehydrogenase (acetylating) (EC 1.2.1.18) from Pseudomonas fluorescens

28% id,
91% cov

More...

putA A3GO_RS0114220 WP_245621743.1: bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA
is similar to:
PaperBLAST

SMc00781: malonate-semialdehyde dehydrogenase (acetylating) (EC 1.2.1.18) from Sinorhizobium meliloti

28% id,
95% cov

mmsA / P42412: (methyl)malonate-semialdehyde dehydrogenase monomer (EC 1.2.1.27; EC 1.2.1.18) from Bacillus subtilis

29% id,
91% cov

dddC / C8YX90: malonate-semialdehyde dehydrogenase (acetylating) (EC 1.2.1.18) from Halomonas sp.

28% id,
89% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 9 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory