Curated BLAST for Genomes

 

Curated BLAST

Searching in Sedimenticola selenatireducens DSM 17993 (GCF_000428045.1)

Found 24 curated entries in PaperBLAST's database that match '2.6.1.5' as complete word(s).

These curated entries have 22 distinct sequences.

Running ublast with E ≤ 0.01

Found 8 relevant proteins in Sedimenticola selenatireducens DSM 17993, or try another query

A3GO_RS0103725 WP_029132260.1: amino acid aminotransferase
is similar to:
PaperBLAST

AspC / b0928: aspartate aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.5; EC 2.6.1.7; EC 2.6.1.3) from Escherichia coli

61% id,
100% cov

TyrB / b4054: tyrosine aminotransferase (EC 2.6.1.57; EC 2.6.1.6; EC 2.6.1.42; EC 2.6.1.1; EC 2.6.1.5; EC 2.6.1.27) from Escherichia coli

42% id,
100% cov

TYRB_KLEPN / O85746: Tyrosine aminotransferase; TyrAT; Aromatic-amino-acid transaminase; Aspartate aminotransferase; EC 2.6.1.5; EC 2.6.1.57; EC 2.6.1.1 from Klebsiella pneumoniae

40% id,
100% cov

hemL A3GO_RS0109800 WP_029133244.1: glutamate-1-semialdehyde 2,1-aminomutase
is similar to:
PaperBLAST

H8WR05: tyrosine transaminase (EC 2.6.1.5) from Variovorax paradoxus

33% id,
92% cov

A3GO_RS0105215 WP_037374699.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

ISS1_ARATH / Q9C969: Aromatic aminotransferase ISS1; Methionine aminotransferase ISS1; Phenylalanine aminotransferase ISS1; Protein INDOLE SEVERE SENSITIVE 1; Protein REVERSAL OF SAV3 PHENOTYPE 1; Tryptophan aminotransferase ISS1; Tyrosine aminotransferase ISS1; EC 2.6.1.27; EC 2.6.1.5; EC 2.6.1.88 from Arabidopsis thaliana

28% id,
94% cov

V5M241: tyrosine transaminase (EC 2.6.1.5) from Petunia x

24% id,
83% cov

A3GO_RS0118350 WP_029134647.1: PLP-dependent aminotransferase family protein
is similar to:
PaperBLAST

Q9FN30: tyrosine transaminase (EC 2.6.1.5) from Arabidopsis thaliana

24% id,
96% cov

A0A2K9VNZ8: tyrosine transaminase (EC 2.6.1.5) from Malus domestica

24% id,
88% cov

ISS1_ARATH / Q9C969: Aromatic aminotransferase ISS1; Methionine aminotransferase ISS1; Phenylalanine aminotransferase ISS1; Protein INDOLE SEVERE SENSITIVE 1; Protein REVERSAL OF SAV3 PHENOTYPE 1; Tryptophan aminotransferase ISS1; Tyrosine aminotransferase ISS1; EC 2.6.1.27; EC 2.6.1.5; EC 2.6.1.88 from Arabidopsis thaliana

24% id,
82% cov

More...

A3GO_RS0105540 WP_037374750.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

A0A2K9VP07: tyrosine transaminase (EC 2.6.1.5) from Malus domestica

25% id,
90% cov

A0A0A7DQ59: tyrosine transaminase (EC 2.6.1.5) from Scutellaria baicalensis

23% id,
95% cov

TAT_ARATH / Q9LVY1: Tyrosine aminotransferase; TAT; L-tyrosine:2-oxoglutarate aminotransferase; EC 2.6.1.5 from Arabidopsis thaliana
Q9LVY1: tyrosine transaminase (EC 2.6.1.5) from Arabidopsis thaliana

24% id,
87% cov

More...

A3GO_RS0110380 WP_029133337.1: aspartate aminotransferase family protein
is similar to:
PaperBLAST

H8WR05: tyrosine transaminase (EC 2.6.1.5) from Variovorax paradoxus

31% id,
68% cov

alaC A3GO_RS0105995 WP_029132638.1: alanine transaminase
is similar to:
PaperBLAST

ATTY_CAEEL / Q93703: Tyrosine aminotransferase; TAT; L-tyrosine:2-oxoglutarate aminotransferase; EC 2.6.1.5 from Caenorhabditis elegans

22% id,
84% cov

A3GO_RS0114755 WP_037375524.1: PLP-dependent aminotransferase family protein
is similar to:
PaperBLAST

AMT1_SERL9 / F8P1W6: L-tyrosine:2-oxoglutarate aminotransferase amt1; Atromentin biosynthesis protein amt1; EC 2.6.1.5 from Serpula lacrymans

25% id,
67% cov

ATRD_TAPPA / B7STY2: L-tyrosine:2-oxoglutarate aminotransferase atrD; Atromentin biosynthesis protein D; EC 2.6.1.5 from Tapinella panuoides

24% id,
70% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 8 reading frames. Except for 4 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

210952-212538 (frame +1) on NZ_ATZE01000010.1 Sedimenticola selenatireducens DSM 17993 A3GODRAFT_scaffold_8.9_C, whole genome shotgun sequence
is similar to:
PaperBLAST

H8WR05: tyrosine transaminase (EC 2.6.1.5) from Variovorax paradoxus
Also see hits to annotated proteins above

33% id,
94% cov

18941-20134 (frame +2) on NZ_ATZE01000007.1 Sedimenticola selenatireducens DSM 17993 A3GODRAFT_scaffold_5.6_C, whole genome shotgun sequence
is similar to:
PaperBLAST

A0A2K9VP07: tyrosine transaminase (EC 2.6.1.5) from Malus domestica
Also see hits to annotated proteins above

24% id,
93% cov

144598-145842 (frame +1) on NZ_ATZE01000016.1 Sedimenticola selenatireducens DSM 17993 A3GODRAFT_scaffold_14.15_C, whole genome shotgun sequence
is similar to:
PaperBLAST

AMT1_SERL9 / F8P1W6: L-tyrosine:2-oxoglutarate aminotransferase amt1; Atromentin biosynthesis protein amt1; EC 2.6.1.5 from Serpula lacrymans
Also see hits to annotated proteins above

25% id,
81% cov

110562-111791 (frame +3) on NZ_ATZE01000007.1 Sedimenticola selenatireducens DSM 17993 A3GODRAFT_scaffold_5.6_C, whole genome shotgun sequence
is similar to:
PaperBLAST

ATTY_CAEEL / Q93703: Tyrosine aminotransferase; TAT; L-tyrosine:2-oxoglutarate aminotransferase; EC 2.6.1.5 from Caenorhabditis elegans
Also see hits to annotated proteins above

22% id,
89% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory