Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfatibacillum aliphaticivorans DSM 15576 (GCF_000429905.1)

Found 19 curated entries in PaperBLAST's database that match '2.5.1.48' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Desulfatibacillum aliphaticivorans DSM 15576, or try another query

G491_RS0107550 WP_028314150.1: PLP-dependent aspartate aminotransferase family protein
is similar to:
PaperBLAST

METB_HELPX / Q1M0P5: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Helicobacter pylori
Q1M0P5: cystathionine gamma-synthase (EC 2.5.1.48) from Helicobacter pylori

40% id,
99% cov

H7C6A2: cystathionine gamma-synthase (EC 2.5.1.48) from Corynebacterium glutamicum

40% id,
97% cov

METB_MYCTU / P9WGB7: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Mycobacterium tuberculosis

39% id,
96% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory