Searching in Desulfogranum mediterraneum DSM 13871 (GCF_000429965.1)
Found 13 curated entries in PaperBLAST's database that match '1.3.1.12' as complete word(s).
These curated entries have 12 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Desulfogranum mediterraneum DSM 13871, or try another query
| G494_RS0104020 WP_028583502.1: 2-oxo acid dehydrogenase subunit E2 is similar to: | PaperBLAST |
P06959: pyruvate dehydrogenase system (EC 1.2.1.104); prephenate dehydrogenase (EC 1.3.1.12); dihydrolipoyllysine-residue acetyltransferase (EC 2.3.1.12) from Escherichia coli | 44% id, 67% cov |
| G494_RS0107600 WP_051305500.1: dihydrolipoamide acetyltransferase family protein is similar to: | PaperBLAST |
P06959: pyruvate dehydrogenase system (EC 1.2.1.104); prephenate dehydrogenase (EC 1.3.1.12); dihydrolipoyllysine-residue acetyltransferase (EC 2.3.1.12) from Escherichia coli | 37% id, 67% cov |
| G494_RS0108960 WP_232362519.1: prephenate dehydratase domain-containing protein is similar to: | PaperBLAST |
TyrA / b2600: fused chorismate mutase/prephenate dehydrogenase (EC 5.4.99.5; EC 1.3.1.12) from Escherichia coli | 23% id, 87% cov |
P43902: prephenate dehydrogenase (EC 1.3.1.12) from Haemophilus influenzae | 26% id, 69% cov |
| pheA G494_RS0101895 WP_028583168.1: prephenate dehydratase is similar to: | PaperBLAST |
O30012: prephenate dehydrogenase (EC 1.3.1.12); prephenate dehydratase (EC 4.2.1.51); chorismate mutase (EC 5.4.99.5) from Archaeoglobus fulgidus | 31% id, 56% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 199998-201329 (frame +3) on NZ_AUCW01000007.1 Desulfogranum mediterraneum DSM 13871 G494DRAFT_scaffold00005.5_C, whole genome shotgun sequence is similar to: | PaperBLAST |
P06959: pyruvate dehydrogenase system (EC 1.2.1.104); prephenate dehydrogenase (EC 1.3.1.12); dihydrolipoyllysine-residue acetyltransferase (EC 2.3.1.12) from Escherichia coli | 44% id, 68% cov |
| 75567-76784 (frame +3) on NZ_AUCW01000004.1 Desulfogranum mediterraneum DSM 13871 G494DRAFT_scaffold00003.3_C, whole genome shotgun sequence is similar to: | PaperBLAST |
O30012: prephenate dehydrogenase (EC 1.3.1.12); prephenate dehydratase (EC 4.2.1.51); chorismate mutase (EC 5.4.99.5) from Archaeoglobus fulgidus | 31% id, 57% cov |
Lawrence Berkeley National Laboratory