Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Desulfogranum mediterraneum DSM 13871 (GCF_000429965.1)

Found 21 curated entries in PaperBLAST's database that match '1.3.8.5' as complete word(s).

These curated entries have 19 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Desulfogranum mediterraneum DSM 13871, or try another query

G494_RS0107500 WP_028584039.1: acyl-CoA dehydrogenase family protein is similar to:	PaperBLAST
MBCD_SOLTU / Q9FS88: 2-methylacyl-CoA dehydrogenase, mitochondrial; 2-methylbutanoyl-CoA dehydrogenase; 2-methylbutyryl-CoA dehydrogenase; 2MBCD; Isovaleryl-CoA dehydrogenase 1; St-IVD1; EC 1.3.8.5 from Solanum tuberosum	54% id, 92% cov
Psest_2440: isobutyryl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas stutzeri	37% id, 99% cov
PS417_13840: isobutyryl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas simiae	37% id, 99% cov
Pf6N2E2_1146: 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas fluorescens	37% id, 99% cov
PfGW456L13_2983: 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas fluorescens	37% id, 99% cov
AO353_25670: isobutyryl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas fluorescens	37% id, 99% cov
AO356_26355: 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas fluorescens	37% id, 99% cov
PfGW456L13_2985: isobutyryl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas fluorescens	37% id, 99% cov
Ac3H11_2996: 2-methyl-branched-chain-enoyl-CoA reductase (EC 1.3.8.5) from Acidovorax sp.	36% id, 99% cov
AO353_25680: 2-methylbutanoyl-CoA dehydrogenase / butanoyl-CoA dehydrogenase / isobutyryl-CoA dehydrogenase (EC 1.3.8.1; EC 1.3.8.5) from Pseudomonas fluorescens	36% id, 99% cov
PS417_13850: 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas simiae	36% id, 99% cov
Pf1N1B4_4787: 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas fluorescens	36% id, 99% cov
Psest_2445: 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas stutzeri	36% id, 98% cov
acdH / Q9XCG5: acyl-CoA dehydrogenase subunit (EC 1.3.8.4; EC 1.3.8.5) from Streptomyces avermitilis	35% id, 99% cov
ACAD8_HUMAN / Q9UKU7: Isobutyryl-CoA dehydrogenase, mitochondrial; IBDH; Activator-recruited cofactor 42 kDa component; ARC42; Acyl-CoA dehydrogenase family member 8; ACAD-8; EC 1.3.8.5 from Homo sapiens	35% id, 91% cov
SO1679: 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) from Shewanella oneidensis	32% id, 99% cov
ACDSB_HUMAN / P45954: Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial; SBCAD; 2-methyl branched chain acyl-CoA dehydrogenase; 2-MEBCAD; 2-methylbutyryl-coenzyme A dehydrogenase; 2-methylbutyryl-CoA dehydrogenase; EC 1.3.8.5 from Homo sapiens ACADSB / P45954: Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial (EC 1.3.8.5) from Homo sapiens	35% id, 88% cov
ACDSB_RAT / P70584: Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial; SBCAD; 2-methyl branched chain acyl-CoA dehydrogenase; 2-MEBCAD; 2-methylbutyryl-coenzyme A dehydrogenase; 2-methylbutyryl-CoA dehydrogenase; EC 1.3.8.5 from Rattus norvegicus Acadsb / P70584: 2-methyl branched chain acyl-CoA dehydrogenase subunit (EC 1.3.8.5) from Rattus norvegicus	34% id, 86% cov
O16843: short-chain 2-methylacyl-CoA dehydrogenase (EC 1.3.8.5) from Ascaris suum	30% id, 93% cov
More...

G494_RS0109105 WP_028584286.1: acyl-CoA dehydrogenase family protein is similar to:	PaperBLAST
AO353_25670: isobutyryl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas fluorescens	42% id, 98% cov
PS417_13850: 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas simiae	42% id, 99% cov
Pf6N2E2_1146: 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas fluorescens	42% id, 99% cov
PfGW456L13_2985: isobutyryl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas fluorescens	42% id, 98% cov
PfGW456L13_2983: 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas fluorescens	41% id, 99% cov
AO356_26355: 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas fluorescens	41% id, 99% cov
Psest_2440: isobutyryl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas stutzeri	42% id, 97% cov
AO353_25680: 2-methylbutanoyl-CoA dehydrogenase / butanoyl-CoA dehydrogenase / isobutyryl-CoA dehydrogenase (EC 1.3.8.1; EC 1.3.8.5) from Pseudomonas fluorescens	41% id, 99% cov
PS417_13840: isobutyryl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas simiae	41% id, 99% cov
Pf1N1B4_4787: 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas fluorescens	40% id, 99% cov
Ac3H11_2996: 2-methyl-branched-chain-enoyl-CoA reductase (EC 1.3.8.5) from Acidovorax sp.	39% id, 99% cov
Psest_2445: 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas stutzeri	39% id, 98% cov
acdH / Q9XCG5: acyl-CoA dehydrogenase subunit (EC 1.3.8.4; EC 1.3.8.5) from Streptomyces avermitilis	38% id, 99% cov
O16843: short-chain 2-methylacyl-CoA dehydrogenase (EC 1.3.8.5) from Ascaris suum	41% id, 91% cov
SO1679: 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) from Shewanella oneidensis	37% id, 98% cov
MBCD_SOLTU / Q9FS88: 2-methylacyl-CoA dehydrogenase, mitochondrial; 2-methylbutanoyl-CoA dehydrogenase; 2-methylbutyryl-CoA dehydrogenase; 2MBCD; Isovaleryl-CoA dehydrogenase 1; St-IVD1; EC 1.3.8.5 from Solanum tuberosum	38% id, 92% cov
ACDSB_HUMAN / P45954: Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial; SBCAD; 2-methyl branched chain acyl-CoA dehydrogenase; 2-MEBCAD; 2-methylbutyryl-coenzyme A dehydrogenase; 2-methylbutyryl-CoA dehydrogenase; EC 1.3.8.5 from Homo sapiens ACADSB / P45954: Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial (EC 1.3.8.5) from Homo sapiens	38% id, 87% cov
ACDSB_RAT / P70584: Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial; SBCAD; 2-methyl branched chain acyl-CoA dehydrogenase; 2-MEBCAD; 2-methylbutyryl-coenzyme A dehydrogenase; 2-methylbutyryl-CoA dehydrogenase; EC 1.3.8.5 from Rattus norvegicus Acadsb / P70584: 2-methyl branched chain acyl-CoA dehydrogenase subunit (EC 1.3.8.5) from Rattus norvegicus	37% id, 87% cov
ACAD8_HUMAN / Q9UKU7: Isobutyryl-CoA dehydrogenase, mitochondrial; IBDH; Activator-recruited cofactor 42 kDa component; ARC42; Acyl-CoA dehydrogenase family member 8; ACAD-8; EC 1.3.8.5 from Homo sapiens	34% id, 90% cov
More...

G494_RS0106840 WP_035245738.1: acyl-CoA dehydrogenase is similar to:	PaperBLAST
PS417_13850: 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas simiae	28% id, 100% cov
AO356_26355: 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas fluorescens	28% id, 100% cov
Pf6N2E2_1146: 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas fluorescens	28% id, 100% cov
Pf1N1B4_4787: 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas fluorescens	28% id, 98% cov
AO353_25680: 2-methylbutanoyl-CoA dehydrogenase / butanoyl-CoA dehydrogenase / isobutyryl-CoA dehydrogenase (EC 1.3.8.1; EC 1.3.8.5) from Pseudomonas fluorescens	28% id, 98% cov
Psest_2445: 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas stutzeri	29% id, 96% cov
PfGW456L13_2983: 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas fluorescens	28% id, 96% cov
acdH / Q9XCG5: acyl-CoA dehydrogenase subunit (EC 1.3.8.4; EC 1.3.8.5) from Streptomyces avermitilis	28% id, 98% cov
PfGW456L13_2985: isobutyryl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas fluorescens	29% id, 89% cov
Psest_2440: isobutyryl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas stutzeri	26% id, 97% cov
MBCD_SOLTU / Q9FS88: 2-methylacyl-CoA dehydrogenase, mitochondrial; 2-methylbutanoyl-CoA dehydrogenase; 2-methylbutyryl-CoA dehydrogenase; 2MBCD; Isovaleryl-CoA dehydrogenase 1; St-IVD1; EC 1.3.8.5 from Solanum tuberosum	28% id, 77% cov
More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory