Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfogranum mediterraneum DSM 13871 (GCF_000429965.1)

Found 31 curated entries in PaperBLAST's database that match '2.7.1.15' as complete word(s).

These curated entries have 24 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Desulfogranum mediterraneum DSM 13871, or try another query

G494_RS0106965 WP_028583954.1: PfkB family carbohydrate kinase
is similar to:
PaperBLAST

AO356_00950: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens

23% id,
95% cov

rfaE1 G494_RS23050 WP_035246269.1: D-glycero-beta-D-manno-heptose-7-phosphate kinase
is similar to:
PaperBLAST

RBSK_ARATH / A1A6H3: Ribokinase; AtRBSK; RK; EC 2.7.1.15 from Arabidopsis thaliana
RBSK / A1A6H3: ribokinase (EC 2.7.1.15) from Arabidopsis thaliana
A1A6H3: ribokinase (EC 2.7.1.15) from Arabidopsis thaliana

24% id,
77% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory