Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfogranum mediterraneum DSM 13871 (GCF_000429965.1)

Found 19 curated entries in PaperBLAST's database that match '2.7.7.12' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Desulfogranum mediterraneum DSM 13871, or try another query

galT G494_RS0102545 WP_028583268.1: galactose-1-phosphate uridylyltransferase
is similar to:
PaperBLAST

UT / Q19TV7: galactose-1-phosphate uridylyltransferase (EC 2.7.7.12) from Cucumis melo

37% id,
97% cov

Q8ZXN7: UDP-glucose-hexose-1-phosphate uridylyltransferase (EC 2.7.7.12) from Pyrobaculum aerophilum

33% id,
96% cov

GAL7_HYPJE / Q96UI1: Galactose-1-phosphate uridylyltransferase; Gal-1-P uridylyltransferase; UDP-glucose--hexose-1-phosphate uridylyltransferase; EC 2.7.7.12 from Hypocrea jecorina

27% id,
52% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

223354-224394 (frame -2) on NZ_AUCW01000004.1 Desulfogranum mediterraneum DSM 13871 G494DRAFT_scaffold00003.3_C, whole genome shotgun sequence
is similar to:
PaperBLAST

UT / Q19TV7: galactose-1-phosphate uridylyltransferase (EC 2.7.7.12) from Cucumis melo
Also see hits to annotated proteins above

37% id,
99% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory