Curated BLAST for Genomes

 

Curated BLAST

Searching in Maridesulfovibrio bastinii DSM 16055 (GCF_000429985.1)

Found 35 curated entries in PaperBLAST's database that match '1.1.1.86' as complete word(s).

These curated entries have 25 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Maridesulfovibrio bastinii DSM 16055, or try another query

ilvC G496_RS0103610 WP_027178077.1: ketol-acid reductoisomerase
is similar to:		 PaperBLAST

D3PT81: ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Meiothermus ruber

 65% id,
97% cov

ILVC_ALIAD / C8WR67: Ketol-acid reductoisomerase (NADP(+)); KARI; Acetohydroxy-acid isomeroreductase; AHIR; Alpha-keto-beta-hydroxylacyl reductoisomerase; Ketol-acid reductoisomerase type 1; Ketol-acid reductoisomerase type I; EC 1.1.1.86 from Alicyclobacillus acidocaldarius
C8WR67: ketol-acid reductoisomerase (NAD+) (EC 1.1.1.382); ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Alicyclobacillus acidocaldarius

 65% id,
95% cov

ilvC / Q0KCU2: acetohydroxyacid isomeroreductase (EC 1.1.1.86) from Cupriavidus necator

 63% id,
97% cov

More...

ilvC G496_RS0111660 WP_027179442.1: ketol-acid reductoisomerase
is similar to:		 PaperBLAST

A6UW80: ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Methanococcus aeolicus

 45% id,
98% cov

Q64BR7: ketol-acid reductoisomerase (NAD+) (EC 1.1.1.382); ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from uncultured archaeon

 41% id,
99% cov

Q4J8K9: ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Sulfolobus acidocaldarius

 41% id,
97% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

50175-50594 (frame +3) on NZ_AUCX01000014.1 Maridesulfovibrio bastinii DSM 16055 G496DRAFT_scaffold00011.11_C, whole genome shotgun sequence
is similar to:		 PaperBLAST

ILV5_ORYSJ / Q65XK0: Ketol-acid reductoisomerase, chloroplastic; Acetohydroxy-acid reductoisomerase; Alpha-keto-beta-hydroxylacyl reductoisomerase; Protein KARI; EC 1.1.1.86 from Oryza sativa
Q65XK0: ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Oryza sativa
Also see hits to annotated proteins above

 46% id,
11% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory