Curated BLAST for Genomes

 

Curated BLAST

Searching in Maridesulfovibrio bastinii DSM 16055 (GCF_000429985.1)

Found 51 curated entries in PaperBLAST's database that match '3.1.3.3' as complete word(s).

These curated entries have 38 distinct sequences.

Running ublast with E ≤ 0.01

Found 9 relevant proteins in Maridesulfovibrio bastinii DSM 16055, or try another query

serB G496_RS0105210 WP_027178352.1: phosphoserine phosphatase SerB
is similar to:
PaperBLAST

SERB_METJA / Q58989: Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3 from Methanocaldococcus jannaschii
Q58989: phosphoserine phosphatase (EC 3.1.3.3) from Methanocaldococcus jannaschii

46% id,
100% cov

SERB_IDILO / Q5QXU4: Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3 from Idiomarina loihiensis

46% id,
97% cov

SERB_STRT2 / Q5M3B3: Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3 from Streptococcus thermophilus

46% id,
96% cov

More...

G496_RS19600 WP_051295010.1: alkaline phosphatase
is similar to:
PaperBLAST

PsiA / b0383: alkaline phosphatase (EC 3.1.3.1; EC 3.1.3.75; EC 3.1.3.41; EC 3.1.3.74; EC 3.1.3.99; EC 3.1.3.5; EC 3.1.3.6; EC 3.1.3.89; EC 3.1.3.91; EC 3.1.3.60; EC 3.1.3.15; EC 3.1.3.102; EC 3.1.3.108; EC 3.1.3.11; EC 3.1.3.20; EC 3.1.3.19; EC 3.1.3.3; EC 3.6.1.25; EC 3.6.1.1; EC 3.1.3.23; EC 3.1.3.38; EC 3.1.3.18; EC 3.1.3.68; EC 3.9.1.1) from Escherichia coli
phoA / P00634: alkaline phosphatase (EC 3.1.3.1; EC 3.1.3.75; EC 3.1.3.41; EC 3.1.3.74; EC 3.1.3.99; EC 3.1.3.5; EC 3.1.3.6; EC 3.1.3.89; EC 3.1.3.91; EC 3.1.3.60; EC 3.1.3.15; EC 3.1.3.102; EC 3.1.3.108; EC 3.1.3.11; EC 3.1.3.20; EC 3.1.3.19; EC 3.1.3.3; EC 3.6.1.25; EC 3.6.1.1; EC 3.1.3.23; EC 3.1.3.38; EC 3.1.3.18; EC 3.1.3.68; EC 3.9.1.1) from Escherichia coli

29% id,
84% cov

G496_RS0111925 WP_027179484.1: histidine phosphatase family protein
is similar to:
PaperBLAST

PSPA_HYDTT / D3DFG8: Phosphoserine phosphatase 1; PSP 1; PSPase 1; Metal-independent phosphoserine phosphatase 1; iPSP1; O-phosphoserine phosphohydrolase 1; EC 3.1.3.3 from Hydrogenobacter thermophilus
D3DFG8: phosphoserine phosphatase (EC 3.1.3.3) from Hydrogenobacter thermophilus

29% id,
78% cov

SERCL_ARATH / F4KI56: Metal-independent phosphoserine phosphatase; iPSP; Phosphoglycerate mutase-like protein 3; EC 3.1.3.3 from Arabidopsis thaliana

29% id,
69% cov

G496_RS0112585 WP_027179593.1: SpoIIE family protein phosphatase
is similar to:
PaperBLAST

RSBU_BACSU / P40399: Phosphoserine phosphatase RsbU; Sigma factor SigB regulation protein RsbU; EC 3.1.3.3 from Bacillus subtilis
P40399: phosphoserine phosphatase (EC 3.1.3.3) from Bacillus subtilis

32% id,
70% cov

G496_RS0112300 WP_245577917.1: SpoIIE family protein phosphatase
is similar to:
PaperBLAST

RSBU_BACSU / P40399: Phosphoserine phosphatase RsbU; Sigma factor SigB regulation protein RsbU; EC 3.1.3.3 from Bacillus subtilis
P40399: phosphoserine phosphatase (EC 3.1.3.3) from Bacillus subtilis

28% id,
71% cov

G496_RS0109205 WP_034632902.1: SpoIIE family protein phosphatase
is similar to:
PaperBLAST

O07014: phosphoserine phosphatase (EC 3.1.3.3) from Bacillus subtilis

27% id,
71% cov

G496_RS0109885 WP_051294969.1: SpoIIE family protein phosphatase
is similar to:
PaperBLAST

O07014: phosphoserine phosphatase (EC 3.1.3.3) from Bacillus subtilis

27% id,
67% cov

G496_RS0117515 WP_027180412.1: D-2-hydroxyacid dehydrogenase
is similar to:
PaperBLAST

Echvi_2777: fused D-3-phosphoglycerate dehydrogenase / phosphoserine phosphatase (EC 1.1.1.95; EC 3.1.3.3) from Echinicola vietnamensis

34% id,
45% cov

G496_RS19260 WP_051294939.1: NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

Echvi_2777: fused D-3-phosphoglycerate dehydrogenase / phosphoserine phosphatase (EC 1.1.1.95; EC 3.1.3.3) from Echinicola vietnamensis

28% id,
47% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 8 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory