Curated BLAST for Genomes

 

Curated BLAST

Searching in Maridesulfovibrio bastinii DSM 16055 (GCF_000429985.1)

Found 116 curated entries in PaperBLAST's database that match '4.1.2.13' as complete word(s).

These curated entries have 92 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Maridesulfovibrio bastinii DSM 16055, or try another query

G496_RS0100765 WP_027177586.1: 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase
is similar to:
PaperBLAST

aroA' / Q57843: 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase monomer (EC 4.1.2.13; EC 2.2.1.10) from Methanocaldococcus jannaschii

58% id,
95% cov

fba / P58314: fructose-1,6-bisphosphate aldolase subunit (EC 4.1.2.13) from Pyrococcus furiosus

36% id,
98% cov

ALF1_THETK / P58315: Fructose-bisphosphate aldolase class 1; Fructose-bisphosphate aldolase class I; FBP aldolase; FBPA; EC 4.1.2.13 from Thermoproteus tenax

34% id,
97% cov

More...

fba G496_RS0112275 WP_027179546.1: class II fructose-1,6-bisphosphate aldolase
is similar to:
PaperBLAST

Q9RHA2: fructose-bisphosphate aldolase (EC 4.1.2.13) from Thermus aquaticus

52% id,
100% cov

ALF_THECA / Q703I2: Fructose-bisphosphate aldolase; FBP aldolase; FBPA; Fructose-1,6-bisphosphate aldolase; EC 4.1.2.13 from Thermus caldophilus

52% id,
100% cov

ALF_GIAIC / A8B2U2: Fructose-bisphosphate aldolase; Glfba; glFBPA; Fructose-1,6-bisphosphate aldolase; EC 4.1.2.13 from Giardia intestinalis

52% id,
95% cov

More...

G496_RS0108445 WP_027178900.1: 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase
is similar to:
PaperBLAST

aroA' / Q57843: 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase monomer (EC 4.1.2.13; EC 2.2.1.10) from Methanocaldococcus jannaschii

36% id,
90% cov

ALF1_THETK / P58315: Fructose-bisphosphate aldolase class 1; Fructose-bisphosphate aldolase class I; FBP aldolase; FBPA; EC 4.1.2.13 from Thermoproteus tenax

35% id,
90% cov

fba / P58314: fructose-1,6-bisphosphate aldolase subunit (EC 4.1.2.13) from Pyrococcus furiosus

30% id,
93% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory