Curated BLAST

Curated BLAST for Genomes

Found 7 curated entries in PaperBLAST's database that match '4.2.1.116' as complete word(s).

These curated entries have 5 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Maridesulfovibrio bastinii DSM 16055, or try another query

acs G496_RS0101040 WP_027177635.1: acetate--CoA ligase is similar to:	PaperBLAST
pcs / A9WEU4: propionyl-CoA synthase subunit (EC 1.3.1.84; EC 4.2.1.116; EC 6.2.1.36) from Chloroflexus aurantiacus	33% id, 27% cov
pcs / A9WEU4: propionyl-CoA synthase subunit (EC 1.3.1.84; EC 4.2.1.116; EC 6.2.1.36) from Chloroflexus aurantiacus	30% id, 10% cov

fabG G496_RS0117155 WP_027180351.1: 3-oxoacyl-[acyl-carrier-protein] reductase is similar to:	PaperBLAST
FOX2 / A0A1D8PJ13: D-specific enoyl-CoA hydratase (EC 4.2.1.119; EC 4.2.1.116) from Candida albicans	32% id, 26% cov

acs G496_RS19275 WP_034632893.1: acetate--CoA ligase is similar to:	PaperBLAST
pcs / A9WEU4: propionyl-CoA synthase subunit (EC 1.3.1.84; EC 4.2.1.116; EC 6.2.1.36) from Chloroflexus aurantiacus	30% id, 27% cov
pcs / A9WEU4: propionyl-CoA synthase subunit (EC 1.3.1.84; EC 4.2.1.116; EC 6.2.1.36) from Chloroflexus aurantiacus	31% id, 12% cov

G496_RS20730 WP_027180098.1: non-ribosomal peptide synthetase is similar to:	PaperBLAST
pcs / A9WEU4: propionyl-CoA synthase subunit (EC 1.3.1.84; EC 4.2.1.116; EC 6.2.1.36) from Chloroflexus aurantiacus	25% id, 12% cov

G496_RS0115690 WP_027180099.1: hybrid non-ribosomal peptide synthetase/type I polyketide synthase is similar to:	PaperBLAST
pcs / A9WEU4: propionyl-CoA synthase subunit (EC 1.3.1.84; EC 4.2.1.116; EC 6.2.1.36) from Chloroflexus aurantiacus	38% id, 4% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory