Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Maridesulfovibrio bastinii DSM 16055 (GCF_000429985.1)

Found 117 curated entries in PaperBLAST's database that match '6.3.1.2' as complete word(s).

These curated entries have 85 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Maridesulfovibrio bastinii DSM 16055, or try another query

G496_RS0118300 WP_027180554.1: glutamine synthetase III is similar to:	PaperBLAST
glnN / Q31RW8: glutamine synthetase type III subunit (EC 6.3.1.2) from Synechococcus elongatus	58% id, 100% cov
gluN / Q4ZH57: glutamine synthetase subunit (EC 6.3.1.2) from Ruminococcus albus	54% id, 99% cov
Q5LGP1: glutamine synthetase (EC 6.3.1.2) from Bacteroides fragilis	45% id, 99% cov
GLNA3_BACFR / P15623: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase III; GSIII; EC 6.3.1.2 from Bacteroides fragilis	45% id, 99% cov
C4L2T5: glutamine synthetase (EC 6.3.1.2) from Exiguobacterium sp.	28% id, 60% cov
P36205: glutamine synthetase (EC 6.3.1.2) from Thermotoga maritima	28% id, 57% cov
GLNA3_HALMT / I3R176: Glutamine synthetase 3; GS3; Glutamate--ammonia ligase; EC 6.3.1.2 from Haloferax mediterranei B8ZJH0: glutamine synthetase (EC 6.3.1.2) from Haloferax mediterranei	24% id, 59% cov
GLNA_METJA / Q60182: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I alpha; GSI alpha; EC 6.3.1.2 from Methanocaldococcus jannaschii Q60182: glutamine synthetase (EC 6.3.1.2) from Methanocaldococcus jannaschii	30% id, 47% cov
GLN1A_BACSU / P12425: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I alpha; GSI alpha; EC 6.3.1.2 from Bacillus subtilis P12425: glutamine synthetase (EC 6.3.1.2) from Bacillus subtilis	32% id, 40% cov
GLNA_THET8 / Q5SIP0: Glutamine synthetase; GS; Glutamate--ammonia ligase; EC 6.3.1.2 from Thermus thermophilus	32% id, 35% cov
GLNA3_RHIME / O87393: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase III; GSIII; EC 6.3.1.2 from Rhizobium meliloti	30% id, 33% cov
Q0E5H7: glutamine synthetase (EC 6.3.1.2) from Halobacillus halophilus	29% id, 32% cov
More...

G496_RS0104845 WP_027178291.1: glutamine synthetase family protein is similar to:	PaperBLAST
P64246: glutamine synthetase (EC 6.3.1.2) from Mycobacterium tuberculosis	52% id, 100% cov
GLNA1_METMA / Q8PY99: Glutamine synthetase; GS; Glutamate--ammonia ligase; EC 6.3.1.2 from Methanosarcina mazei Q8PY99: glutamine synthetase (EC 6.3.1.2) from Methanosarcina mazei	52% id, 99% cov
GLN1A_BACSU / P12425: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I alpha; GSI alpha; EC 6.3.1.2 from Bacillus subtilis P12425: glutamine synthetase (EC 6.3.1.2) from Bacillus subtilis	51% id, 98% cov
C4L2T5: glutamine synthetase (EC 6.3.1.2) from Exiguobacterium sp.	49% id, 100% cov
P36205: glutamine synthetase (EC 6.3.1.2) from Thermotoga maritima	49% id, 99% cov
GLNA3_HALMT / I3R176: Glutamine synthetase 3; GS3; Glutamate--ammonia ligase; EC 6.3.1.2 from Haloferax mediterranei B8ZJH0: glutamine synthetase (EC 6.3.1.2) from Haloferax mediterranei	49% id, 96% cov
GLNA_METJA / Q60182: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I alpha; GSI alpha; EC 6.3.1.2 from Methanocaldococcus jannaschii Q60182: glutamine synthetase (EC 6.3.1.2) from Methanocaldococcus jannaschii	48% id, 98% cov
GLNA_THET8 / Q5SIP0: Glutamine synthetase; GS; Glutamate--ammonia ligase; EC 6.3.1.2 from Thermus thermophilus	48% id, 98% cov
P36687: glutamine synthetase (EC 6.3.1.2) from Pyrococcus woesei	47% id, 97% cov
Q0E5H7: glutamine synthetase (EC 6.3.1.2) from Halobacillus halophilus	46% id, 98% cov
GLNA_THEKO / O08467: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I alpha; GSI alpha; EC 6.3.1.2 from Thermococcus kodakarensis O08467: glutamine synthetase (EC 6.3.1.2) from Pyrococcus sp.	45% id, 96% cov
GLNA_SULAC / Q9HH09: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I alpha; GSI alpha; EC 6.3.1.2 from Sulfolobus acidocaldarius Q9HH09: glutamine synthetase (EC 6.3.1.2) from Sulfolobus acidocaldarius	41% id, 99% cov
GLN1B_SYNY3 / P77961: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Synechocystis sp. P77961: glutamine synthetase (EC 6.3.1.2) from Synechocystis sp.	37% id, 95% cov
GLN1B_PSETA / Q3V5W6: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Pseudomonas taetrolens	38% id, 89% cov
GLN1B_NOSS1 / P00964: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Nostoc sp.	36% id, 94% cov
Q9RHZ1: glutamine synthetase (EC 6.3.1.2) from Trichormus azollae	36% id, 95% cov
GLNA3_RHIME / O87393: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase III; GSIII; EC 6.3.1.2 from Rhizobium meliloti	32% id, 99% cov
glnA: glutamate--ammonia ligase; EC 6.3.1.2 from Escherichia coli glnA / P0A9C5: glutamine synthetase (EC 6.3.1.2) from Escherichia coli	38% id, 72% cov
GLNA_ARCFU / O29313: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I alpha; GSI alpha; EC 6.3.1.2 from Archaeoglobus fulgidus O29313: glutamine synthetase (EC 6.3.1.2) from Archaeoglobus fulgidus	44% id, 63% cov
GLN1B_SALTY / P0A1P6: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Salmonella typhimurium glnA: glutamate--ammonia ligase; EC 6.3.1.2 from Salmonella enterica P0A1P6: glutamine synthetase (EC 6.3.1.2) from Salmonella enterica	46% id, 53% cov
O85177: glutamine synthetase (EC 6.3.1.2) from Amycolatopsis mediterranei	39% id, 64% cov
GLN1B_STRCO / P15106: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Streptomyces coelicolor P15106: glutamine synthetase (EC 6.3.1.2) from Streptomyces coelicolor	45% id, 54% cov
GLN1B_MYCBO / P0A591: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Mycobacterium bovis GLN1B_MYCTU / P9WN39: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Mycobacterium tuberculosis P0A591: glutamine synthetase (EC 6.3.1.2) from Mycobacterium tuberculosis P9WN39: glutamine synthetase (EC 6.3.1.2) from Mycobacterium tuberculosis	38% id, 61% cov
Q7ZVF2: glutamine synthetase (EC 6.3.1.2) from Danio rerio	24% id, 92% cov
Q7T2P7: glutamine synthetase (EC 6.3.1.2) from Danio rerio	24% id, 93% cov
GLNA_RAT / P09606: Glutamine synthetase; GS; Glutamate--ammonia ligase; Palmitoyltransferase GLUL; EC 6.3.1.2; EC 2.3.1.225 from Rattus norvegicus P09606: glutamine synthetase (EC 6.3.1.2) from Rattus norvegicus	26% id, 87% cov
GLNA_HUMAN / P15104: Glutamine synthetase; GS; Glutamate--ammonia ligase; Palmitoyltransferase GLUL; EC 6.3.1.2; EC 2.3.1.225 from Homo sapiens GLUL / P15104: glutamine synthetase subunit (EC 6.3.1.2) from Homo sapiens P15104: glutamine synthetase (EC 6.3.1.2) from Homo sapiens	26% id, 87% cov
GLNA_MOUSE / P15105: Glutamine synthetase; GS; Glutamate--ammonia ligase; Palmitoyltransferase GLUL; EC 6.3.1.2; EC 2.3.1.225 from Mus musculus P15105: glutamine synthetase (EC 6.3.1.2) from Mus musculus	26% id, 87% cov
GLNA_CANLF / Q8HZM5: Glutamine synthetase; GS; Glutamate--ammonia ligase; Palmitoyltransferase GLUL; EC 6.3.1.2; EC 2.3.1.225 from Canis lupus Q8HZM5: glutamine synthetase (EC 6.3.1.2) from Canis lupus	25% id, 87% cov
GLNA_SQUAC / P41320: Glutamine synthetase, mitochondrial; Glutamate--ammonia ligase; EC 6.3.1.2 from Squalus acanthias	24% id, 87% cov
P46410: glutamine synthetase (EC 6.3.1.2) from Sus scrofa	26% id, 70% cov
GLN1B_MYCBO / P0A591: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Mycobacterium bovis GLN1B_MYCTU / P9WN39: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Mycobacterium tuberculosis P0A591: glutamine synthetase (EC 6.3.1.2) from Mycobacterium tuberculosis P9WN39: glutamine synthetase (EC 6.3.1.2) from Mycobacterium tuberculosis	29% id, 41% cov
O85177: glutamine synthetase (EC 6.3.1.2) from Amycolatopsis mediterranei	28% id, 41% cov
More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory