Curated BLAST for Genomes

 

Curated BLAST

Searching in Azohydromonas australica DSM 1124 (GCF_000430725.1)

Found 16 curated entries in PaperBLAST's database that match '4.2.1.9' as complete word(s).

These curated entries have 12 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Azohydromonas australica DSM 1124, or try another query

ilvD H537_RS0118680 WP_028999050.1: dihydroxy-acid dehydratase
is similar to:		 PaperBLAST

ilvD / Q0K7F8: dihydroxyacid dehydratase (EC 4.2.1.9) from Cupriavidus necator
Q0K7F8: dihydroxy-acid dehydratase (EC 4.2.1.9) from Cupriavidus necator

 76% id,
100% cov

ILVD_MYCTU / P9WKJ5: Dihydroxy-acid dehydratase; DAD; EC 4.2.1.9 from Mycobacterium tuberculosis

 50% id,
96% cov

ILVC_ASPFU / Q4X099: Dihydroxy-acid dehydratase ilvC, mitochondrial; DHAD ilvC; EC 4.2.1.9 from Aspergillus fumigatus

 48% id,
94% cov

More...

ilvD H537_RS0112690 WP_028998224.1: dihydroxy-acid dehydratase
is similar to:		 PaperBLAST

ilvDD / O27498: dihydroxy-acid dehydratase subunit (EC 4.2.1.9) from Methanothermobacter thermautotrophicus

 41% id,
96% cov

Q97UB2: dihydroxy-acid dehydratase (EC 4.2.1.9) from Saccharolobus solfataricus

 37% id,
96% cov

ILVD_MYCTU / P9WKJ5: Dihydroxy-acid dehydratase; DAD; EC 4.2.1.9 from Mycobacterium tuberculosis

 37% id,
94% cov

More...

H537_RS0137420 WP_029001945.1: IlvD/Edd family dehydratase
is similar to:		 PaperBLAST

ilvDD / O27498: dihydroxy-acid dehydratase subunit (EC 4.2.1.9) from Methanothermobacter thermautotrophicus

 37% id,
95% cov

ILVD_MYCTU / P9WKJ5: Dihydroxy-acid dehydratase; DAD; EC 4.2.1.9 from Mycobacterium tuberculosis

 38% id,
94% cov

Q97UB2: dihydroxy-acid dehydratase (EC 4.2.1.9) from Saccharolobus solfataricus

 35% id,
96% cov

More...

H537_RS0125690 WP_029000136.1: IlvD/Edd family dehydratase
is similar to:		 PaperBLAST

ilvDD / O27498: dihydroxy-acid dehydratase subunit (EC 4.2.1.9) from Methanothermobacter thermautotrophicus

 34% id,
98% cov

ilvD / Q0K7F8: dihydroxyacid dehydratase (EC 4.2.1.9) from Cupriavidus necator
Q0K7F8: dihydroxy-acid dehydratase (EC 4.2.1.9) from Cupriavidus necator

 32% id,
93% cov

ILVD_MYCTU / P9WKJ5: Dihydroxy-acid dehydratase; DAD; EC 4.2.1.9 from Mycobacterium tuberculosis

 32% id,
90% cov

More...

edd H537_RS0119225 WP_028999114.1: phosphogluconate dehydratase
is similar to:		 PaperBLAST

ilvDD / O27498: dihydroxy-acid dehydratase subunit (EC 4.2.1.9) from Methanothermobacter thermautotrophicus

 32% id,
94% cov

Q97UB2: dihydroxy-acid dehydratase (EC 4.2.1.9) from Saccharolobus solfataricus

 30% id,
93% cov

ILVD_RHIJ3 / Q1MIB2: Dihydroxy-acid dehydratase; DAD; EC 4.2.1.9 from Rhizobium johnstonii

 31% id,
88% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

117036-118877 (frame -3) on NZ_KE387216.1 Azohydromonas australica DSM 1124 H537DRAFT_scaffold00023.23, whole genome shotgun sequence
is similar to:		 PaperBLAST

ILVD_MYCTU / P9WKJ5: Dihydroxy-acid dehydratase; DAD; EC 4.2.1.9 from Mycobacterium tuberculosis
Also see hits to annotated proteins above

 37% id,
99% cov

ILV3_YEAST / P39522: Dihydroxy-acid dehydratase, mitochondrial; DAD; EC 4.2.1.9 from Saccharomyces cerevisiae
Also see hits to annotated proteins above

 33% id,
98% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory