Curated BLAST for Genomes

 

Curated BLAST

Searching in Azohydromonas australica DSM 1124 (GCF_000430725.1)

Found 1 curated entries in PaperBLAST's database that match 'small subunit of acetolactate synthase' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Azohydromonas australica DSM 1124, or try another query

ilvN H537_RS0119915 WP_028999234.1: acetolactate synthase small subunit
is similar to:
PaperBLAST

AN4430: small subunit of acetolactate synthase from Emericella nidulans

48% id,
31% cov

H537_RS0111835 WP_028998099.1: homoserine dehydrogenase
is similar to:
PaperBLAST

AN4430: small subunit of acetolactate synthase from Emericella nidulans

34% id,
26% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

181558-182217 (frame -3) on NZ_KE387203.1 Azohydromonas australica DSM 1124 H537DRAFT_scaffold00001.1, whole genome shotgun sequence
is similar to:
PaperBLAST

AN4430: small subunit of acetolactate synthase from Emericella nidulans
Also see hits to annotated proteins above

36% id,
48% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory