Curated BLAST for Genomes

 

Curated BLAST

Searching in Schleiferilactobacillus shenzhenensis LY-73 (GCF_000469325.1)

Found 24 curated entries in PaperBLAST's database that match '1.2.1.24' as complete word(s).

These curated entries have 19 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Schleiferilactobacillus shenzhenensis LY-73, or try another query

L248_RS04605 L248_2058 WP_022528925.1: NAD-dependent succinate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

slr0370 / Q55585: NAD-dependent succinate-semialdehyde dehydrogenase (EC 1.2.1.24) from Synechocystis sp.

41% id,
99% cov

YneI / b1525: succinate semialdehyde dehydrogenase (NAD(P)+) Sad (EC 1.2.1.24) from Escherichia coli
sad / P76149: succinate semialdehyde dehydrogenase (NAD(P)+) Sad (EC 1.2.1.24; EC 1.2.1.20) from Escherichia coli

36% id,
96% cov

KGSD1_AZOBR / Q1JUP4: Alpha-ketoglutaric semialdehyde dehydrogenase 1; alphaKGSA dehydrogenase 1; 2,5-dioxovalerate dehydrogenase 1; 2-oxoglutarate semialdehyde dehydrogenase 1; KGSADH-I; Succinate-semialdehyde dehydrogenase [NAD(+)]; SSDH; EC 1.2.1.26; EC 1.2.1.24 from Azospirillum brasilense
Q1JUP4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24); 2,5-dioxovalerate dehydrogenase (EC 1.2.1.26) from Azospirillum brasilense

34% id,
90% cov

More...

L248_RS09815 L248_0723 WP_022530055.1: NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

SSR1 / B1Q3F6: NAD-dependent succinate semialdehyde dehydrogenase (EC 1.2.1.24) from Solanum lycopersicum

34% id,
95% cov

L248_RS04175 L248_1970 WP_040534764.1: NAD(P)-binding domain-containing protein
is similar to:
PaperBLAST

SSR1 / B1Q3F6: NAD-dependent succinate semialdehyde dehydrogenase (EC 1.2.1.24) from Solanum lycopersicum

28% id,
78% cov

L248_RS04130 L248_1960 WP_040534750.1: NAD(P)-binding domain-containing protein
is similar to:
PaperBLAST

SSR1 / B1Q3F6: NAD-dependent succinate semialdehyde dehydrogenase (EC 1.2.1.24) from Solanum lycopersicum

28% id,
78% cov

gndA L248_RS05745 L248_2585 WP_040535124.1: NADP-dependent phosphogluconate dehydrogenase
is similar to:
PaperBLAST

SSR1 / B1Q3F6: NAD-dependent succinate semialdehyde dehydrogenase (EC 1.2.1.24) from Solanum lycopersicum

24% id,
71% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory