Curated BLAST for Genomes

 

Curated BLAST

Searching in Schleiferilactobacillus shenzhenensis LY-73 (GCF_000469325.1)

Found 2 curated entries in PaperBLAST's database that match '2.7.1.13' as complete word(s).

These curated entries have 2 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Schleiferilactobacillus shenzhenensis LY-73, or try another query

L248_RS07595 L248_2987 WP_022529572.1: sugar kinase
is similar to:
PaperBLAST

Q4KD57: 2-ketogluconokinase (EC 2.7.1.13) from Pseudomonas fluorescens

43% id,
95% cov

Q0K080: dehydrogluconokinase (EC 2.7.1.13); 2-dehydro-3-deoxygluconokinase (EC 2.7.1.45) from Cupriavidus necator

41% id,
97% cov

rbsK L248_RS10315 L248_0824 WP_022530156.1: ribokinase
is similar to:
PaperBLAST

Q0K080: dehydrogluconokinase (EC 2.7.1.13); 2-dehydro-3-deoxygluconokinase (EC 2.7.1.45) from Cupriavidus necator

29% id,
94% cov

L248_RS06890 L248_2839 WP_022529424.1: sugar kinase
is similar to:
PaperBLAST

Q0K080: dehydrogluconokinase (EC 2.7.1.13); 2-dehydro-3-deoxygluconokinase (EC 2.7.1.45) from Cupriavidus necator

30% id,
55% cov

Q4KD57: 2-ketogluconokinase (EC 2.7.1.13) from Pseudomonas fluorescens

30% id,
54% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory