Curated BLAST for Genomes

 

Curated BLAST

Searching in Schleiferilactobacillus shenzhenensis LY-73 (GCF_000469325.1)

Found 53 curated entries in PaperBLAST's database that match '2.7.1.4' as complete word(s).

These curated entries have 46 distinct sequences.

Running ublast with E ≤ 0.01

Found 11 relevant proteins in Schleiferilactobacillus shenzhenensis LY-73, or try another query

L248_RS03545 L248_1416 WP_040534603.1: ROK family protein
is similar to:
PaperBLAST

fruK / Q8KMQ5: fructokinase (EC 2.7.1.4) from Limosilactobacillus fermentum

47% id,
99% cov

SCRK_BACSU / O05510: Putative fructokinase; Glucomannan utilization protein E; EC 2.7.1.4 from Bacillus subtilis
O05510: fructokinase (EC 2.7.1.4) from Bacillus subtilis

48% id,
96% cov

Ga0059261_1776: Fructokinase (EC 2.7.1.4) from Sphingomonas koreensis

47% id,
86% cov

L248_RS05860 L248_2611 WP_040535140.1: ROK family glucokinase
is similar to:
PaperBLAST

MAK_ECOLI / P23917: Fructokinase; D-fructose kinase; Manno(fructo)kinase; EC 2.7.1.4 from Escherichia coli
Mak / b0394: fructokinase (EC 2.7.1.7; EC 2.7.1.4) from Escherichia coli
mak / P23917: fructokinase (EC 2.7.1.7; EC 2.7.1.4) from Escherichia coli

33% id,
99% cov

Ga0059261_1776: Fructokinase (EC 2.7.1.4) from Sphingomonas koreensis

29% id,
63% cov

SCRK_BACSU / O05510: Putative fructokinase; Glucomannan utilization protein E; EC 2.7.1.4 from Bacillus subtilis
O05510: fructokinase (EC 2.7.1.4) from Bacillus subtilis

29% id,
61% cov

L248_RS07595 L248_2987 WP_022529572.1: sugar kinase
is similar to:
PaperBLAST

A0A0H3AER7: fructokinase (EC 2.7.1.4) from Vibrio cholerae

30% id,
96% cov

Q9FLH8: fructokinase (EC 2.7.1.4) from Arabidopsis thaliana

31% id,
94% cov

Q9M1B9: fructokinase (EC 2.7.1.4) from Arabidopsis thaliana

29% id,
98% cov

More...

rbsK L248_RS10315 L248_0824 WP_022530156.1: ribokinase
is similar to:
PaperBLAST

SCRK1_ORYSI / A2WXV8: Fructokinase-1; Fructokinase I; OsFKI; EC 2.7.1.4 from Oryza sativa

30% id,
96% cov

SCRK1_ORYSJ / Q0JGZ6: Fructokinase-1; Fructokinase I; OsFKI; EC 2.7.1.4 from Oryza sativa

30% id,
96% cov

SCRK1_MAIZE / Q6XZ79: Fructokinase-1; ZmFRK1; EC 2.7.1.4 from Zea mays

29% id,
98% cov

More...

L248_RS04795 L248_2302 WP_022528968.1: ROK family protein
is similar to:
PaperBLAST

Ga0059261_1776: Fructokinase (EC 2.7.1.4) from Sphingomonas koreensis

31% id,
85% cov

SCRK_BACSU / O05510: Putative fructokinase; Glucomannan utilization protein E; EC 2.7.1.4 from Bacillus subtilis
O05510: fructokinase (EC 2.7.1.4) from Bacillus subtilis

28% id,
61% cov

L248_RS08620 L248_0457 WP_022529790.1: ROK family protein
is similar to:
PaperBLAST

SCRK_BACSU / O05510: Putative fructokinase; Glucomannan utilization protein E; EC 2.7.1.4 from Bacillus subtilis
O05510: fructokinase (EC 2.7.1.4) from Bacillus subtilis

27% id,
94% cov

Ga0059261_1776: Fructokinase (EC 2.7.1.4) from Sphingomonas koreensis

24% id,
86% cov

L248_RS08730 L248_0485 WP_040535817.1: ROK family protein
is similar to:
PaperBLAST

MAK_ECOLI / P23917: Fructokinase; D-fructose kinase; Manno(fructo)kinase; EC 2.7.1.4 from Escherichia coli
Mak / b0394: fructokinase (EC 2.7.1.7; EC 2.7.1.4) from Escherichia coli
mak / P23917: fructokinase (EC 2.7.1.7; EC 2.7.1.4) from Escherichia coli

26% id,
89% cov

L248_RS06890 L248_2839 WP_022529424.1: sugar kinase
is similar to:
PaperBLAST

cscK / GB|CAA57218.2: fructokinase; EC 2.7.1.4 from Escherichia coli

23% id,
96% cov

Q42645: fructokinase (EC 2.7.1.4) from Beta vulgaris

21% id,
97% cov

SCRK_KLEPN / P26420: Fructokinase; EC 2.7.1.4 from Klebsiella pneumoniae
scrK / GB|CAA43322.1: fructokinase; EC 2.7.1.4 from Klebsiella pneumoniae
scrK / P26420: fructokinase (EC 2.7.1.4) from Klebsiella pneumoniae

24% id,
67% cov

More...

pfkB L248_RS01410 L248_0306 WP_040534384.1: 1-phosphofructokinase
is similar to:
PaperBLAST

Dshi_2797: Fructokinase (EC 2.7.1.4) from Dinoroseobacter shibae

31% id,
49% cov

C4M2I2: fructokinase (EC 2.7.1.4) from Entamoeba histolytica

28% id,
30% cov

L248_RS08005 L248_3075 WP_022529660.1: ROK family protein
is similar to:
PaperBLAST

Ga0059261_1776: Fructokinase (EC 2.7.1.4) from Sphingomonas koreensis

26% id,
49% cov

MAK_ECOLI / P23917: Fructokinase; D-fructose kinase; Manno(fructo)kinase; EC 2.7.1.4 from Escherichia coli
Mak / b0394: fructokinase (EC 2.7.1.7; EC 2.7.1.4) from Escherichia coli
mak / P23917: fructokinase (EC 2.7.1.7; EC 2.7.1.4) from Escherichia coli

27% id,
30% cov

pfkB L248_RS08245 L248_3126 WP_022529711.1: 1-phosphofructokinase
is similar to:
PaperBLAST

Dshi_2797: Fructokinase (EC 2.7.1.4) from Dinoroseobacter shibae

32% id,
26% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 11 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

44959-45870 (frame +1) on NZ_KI271591.1 Schleiferilactobacillus shenzhenensis LY-73 LY73.Scaffold10, whole genome shotgun sequence
is similar to:
PaperBLAST

SCRK_BACSU / O05510: Putative fructokinase; Glucomannan utilization protein E; EC 2.7.1.4 from Bacillus subtilis
O05510: fructokinase (EC 2.7.1.4) from Bacillus subtilis
Also see hits to annotated proteins above

25% id,
97% cov

109444-110409 (frame -2) on NZ_KI271589.1 Schleiferilactobacillus shenzhenensis LY-73 LY73.Scaffold8, whole genome shotgun sequence
is similar to:
PaperBLAST

SCRK_BACSU / O05510: Putative fructokinase; Glucomannan utilization protein E; EC 2.7.1.4 from Bacillus subtilis
O05510: fructokinase (EC 2.7.1.4) from Bacillus subtilis
Also see hits to annotated proteins above

23% id,
96% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory