Curated BLAST for Genomes

 

Curated BLAST

Searching in Schleiferilactobacillus shenzhenensis LY-73 (GCF_000469325.1)

Found 31 curated entries in PaperBLAST's database that match '2.7.2.1' as complete word(s).

These curated entries have 23 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Schleiferilactobacillus shenzhenensis LY-73, or try another query

L248_RS13095 L248_1730 WP_022530736.1: acetate kinase
is similar to:
PaperBLAST

Q9F1X7: acetate kinase (EC 2.7.2.1) from Fructilactobacillus sanfranciscensis

54% id,
99% cov

ACKA_BACSU / P37877: Acetate kinase; Acetokinase; EC 2.7.2.1 from Bacillus subtilis

53% id,
99% cov

A2RNG5: acetate kinase (EC 2.7.2.1) from Lactococcus lactis

51% id,
98% cov

More...

L248_RS11225 L248_1017 WP_022530349.1: acetate kinase
is similar to:
PaperBLAST

ACKA_BACSU / P37877: Acetate kinase; Acetokinase; EC 2.7.2.1 from Bacillus subtilis

51% id,
100% cov

Q9F1X7: acetate kinase (EC 2.7.2.1) from Fructilactobacillus sanfranciscensis

47% id,
100% cov

A2RNG4: acetate kinase (EC 2.7.2.1) from Lactococcus lactis

47% id,
99% cov

More...

purK L248_RS08590 L248_0452 WP_022529785.1: 5-(carboxyamino)imidazole ribonucleotide synthase
is similar to:
PaperBLAST

PurT / b1849: phosphoribosylglycinamide formyltransferase 2 (EC 2.7.2.15; EC 2.7.2.1) from Escherichia coli

25% id,
93% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory