Curated BLAST for Genomes

 

Curated BLAST

Searching in Schleiferilactobacillus shenzhenensis LY-73 (GCF_000469325.1)

Found 15 curated entries in PaperBLAST's database that match '2.7.2.15' as complete word(s).

These curated entries have 11 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Schleiferilactobacillus shenzhenensis LY-73, or try another query

L248_RS13095 L248_1730 WP_022530736.1: acetate kinase
is similar to:
PaperBLAST

ackA / P71104: acetate kinase monomer (EC 2.7.2.15) from Clostridium acetobutylicum

48% id,
98% cov

PDUW_CITFR / B1VB81: Propionate kinase; EC 2.7.2.15 from Citrobacter freundii

46% id,
97% cov

ackA / E3PRH0: acetate kinase (EC 2.7.2.15) from Acetoanaerobium sticklandii

44% id,
99% cov

More...

L248_RS11225 L248_1017 WP_022530349.1: acetate kinase
is similar to:
PaperBLAST

PDUW_CITFR / B1VB81: Propionate kinase; EC 2.7.2.15 from Citrobacter freundii

46% id,
97% cov

PDUW_SALTY / P74879: Propionate kinase PduW; EC 2.7.2.15 from Salmonella typhimurium

46% id,
97% cov

ackA / E3PRH0: acetate kinase (EC 2.7.2.15) from Acetoanaerobium sticklandii

44% id,
99% cov

More...

purK L248_RS08590 L248_0452 WP_022529785.1: 5-(carboxyamino)imidazole ribonucleotide synthase
is similar to:
PaperBLAST

PurT / b1849: phosphoribosylglycinamide formyltransferase 2 (EC 2.7.2.15; EC 2.7.2.1) from Escherichia coli
purT / P33221: phosphoribosylglycinamide formyltransferase 2 (EC 6.3.1.21; EC 2.7.2.15) from Escherichia coli

25% id,
93% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory