Curated BLAST for Genomes

 

Curated BLAST

Searching in Schleiferilactobacillus shenzhenensis LY-73 (GCF_000469325.1)

Found 17 curated entries in PaperBLAST's database that match '3.2.1.93' as complete word(s).

These curated entries have 11 distinct sequences.

Running ublast with E ≤ 0.01

Found 9 relevant proteins in Schleiferilactobacillus shenzhenensis LY-73, or try another query

L248_RS09350 L248_0623 WP_022529955.1: alpha-glucosidase
is similar to:		 PaperBLAST

TREC_BACSU / P39795: Trehalose-6-phosphate hydrolase; Alpha,alpha-phosphotrehalase; Phospho-alpha-(1-1)-glucosidase; EC 3.2.1.93 from Bacillus subtilis
CAB12610.1: trehalose-6-phosphate hydrolase (TreA;BSU07810) (EC 3.2.1.93)
treA / P39795: trehalose-6-phosphate hydrolase (EC 3.2.1.93) from Bacillus subtilis

 50% id,
98% cov

BAG86620.1: trehalose-6-phosphate hydrolase (TreC;KP1_0530) (EC 3.2.1.93)

 49% id,
99% cov

AAG31032.1: trehalose-6-phosphate hydrolase (TreA) (EC 3.2.1.93)

 49% id,
98% cov

More...

L248_RS08805 L248_0501 WP_022529834.1: alpha-glucosidase
is similar to:		 PaperBLAST

TREC_BACSU / P39795: Trehalose-6-phosphate hydrolase; Alpha,alpha-phosphotrehalase; Phospho-alpha-(1-1)-glucosidase; EC 3.2.1.93 from Bacillus subtilis
CAB12610.1: trehalose-6-phosphate hydrolase (TreA;BSU07810) (EC 3.2.1.93)
treA / P39795: trehalose-6-phosphate hydrolase (EC 3.2.1.93) from Bacillus subtilis

 50% id,
98% cov

BAG86620.1: trehalose-6-phosphate hydrolase (TreC;KP1_0530) (EC 3.2.1.93)

 49% id,
99% cov

PS417_23045: Alpha,alpha-phosphotrehalase (EC 3.2.1.93) from Pseudomonas simiae

 48% id,
99% cov

More...

L248_RS04810 L248_2305 WP_022528971.1: alpha,alpha-phosphotrehalase
is similar to:		 PaperBLAST

TREC_BACSU / P39795: Trehalose-6-phosphate hydrolase; Alpha,alpha-phosphotrehalase; Phospho-alpha-(1-1)-glucosidase; EC 3.2.1.93 from Bacillus subtilis
CAB12610.1: trehalose-6-phosphate hydrolase (TreA;BSU07810) (EC 3.2.1.93)
treA / P39795: trehalose-6-phosphate hydrolase (EC 3.2.1.93) from Bacillus subtilis

 47% id,
98% cov

TREC_ECOLI / P28904: Trehalose-6-phosphate hydrolase; Alpha,alpha-phosphotrehalase; EC 3.2.1.93 from Escherichia coli
TreE / b4239: trehalose-6-phosphate hydrolase (EC 3.2.1.93) from Escherichia coli
AAC77196.1: trehalose-6-phosphate hydrolase (TreC) (EC 3.2.1.93)
treC / P28904: trehalose-6-phosphate hydrolase (EC 3.2.1.93) from Escherichia coli

 46% id,
99% cov

BAB38639.1: trehalose 6-P hydrolase (ECs5216) (EC 3.2.1.93)

 46% id,
99% cov

More...

L248_RS13015 L248_1713 WP_022530719.1: alpha-glucosidase
is similar to:		 PaperBLAST

PS417_23045: Alpha,alpha-phosphotrehalase (EC 3.2.1.93) from Pseudomonas simiae

 37% id,
99% cov

BAG86620.1: trehalose-6-phosphate hydrolase (TreC;KP1_0530) (EC 3.2.1.93)

 37% id,
99% cov

AAG31032.1: trehalose-6-phosphate hydrolase (TreA) (EC 3.2.1.93)

 36% id,
99% cov

More...

L248_RS14705 L248_2470 WP_022531051.1: alpha-amylase family glycosyl hydrolase
is similar to:		 PaperBLAST

AAG31032.1: trehalose-6-phosphate hydrolase (TreA) (EC 3.2.1.93)

 33% id,
64% cov

AO353_15985: Alpha,alpha-phosphotrehalase (EC 3.2.1.93) from Pseudomonas fluorescens

 33% id,
64% cov

TREC_ECOLI / P28904: Trehalose-6-phosphate hydrolase; Alpha,alpha-phosphotrehalase; EC 3.2.1.93 from Escherichia coli
TreE / b4239: trehalose-6-phosphate hydrolase (EC 3.2.1.93) from Escherichia coli
AAC77196.1: trehalose-6-phosphate hydrolase (TreC) (EC 3.2.1.93)
treC / P28904: trehalose-6-phosphate hydrolase (EC 3.2.1.93) from Escherichia coli

 33% id,
65% cov

More...

L248_RS13020 L248_1714 WP_022530720.1: glycoside hydrolase family 13 protein
is similar to:		 PaperBLAST

TREC_ECOLI / P28904: Trehalose-6-phosphate hydrolase; Alpha,alpha-phosphotrehalase; EC 3.2.1.93 from Escherichia coli
TreE / b4239: trehalose-6-phosphate hydrolase (EC 3.2.1.93) from Escherichia coli
AAC77196.1: trehalose-6-phosphate hydrolase (TreC) (EC 3.2.1.93)
treC / P28904: trehalose-6-phosphate hydrolase (EC 3.2.1.93) from Escherichia coli

 24% id,
88% cov

AAU39732.1: trehalose-6-P hydrolase (TreA;BlTreA;BLi00797;BL03069) (EC 3.2.1.93)
Q65MI2: alpha,alpha-phosphotrehalase (EC 3.2.1.93) from Bacillus licheniformis

 28% id,
38% cov

AAV42863.1: LBA1014 (TreC;La1014) (EC 3.2.1.93)

 29% id,
35% cov

L248_RS10095 L248_0777 WP_022530109.1: glycoside hydrolase family 13 protein
is similar to:		 PaperBLAST

ABF38825.1: MGAS10750_Spy1875 (DexS) (EC 3.2.1.93)

 26% id,
66% cov

PS417_23045: Alpha,alpha-phosphotrehalase (EC 3.2.1.93) from Pseudomonas simiae

 25% id,
68% cov

AAV42863.1: LBA1014 (TreC;La1014) (EC 3.2.1.93)

 24% id,
65% cov

L248_RS16455 L248_2469 WP_022531050.1: alpha-amylase family glycosyl hydrolase
is similar to:		 PaperBLAST

BAB38639.1: trehalose 6-P hydrolase (ECs5216) (EC 3.2.1.93)

 57% id,
30% cov

TREC_ECOLI / P28904: Trehalose-6-phosphate hydrolase; Alpha,alpha-phosphotrehalase; EC 3.2.1.93 from Escherichia coli
TreE / b4239: trehalose-6-phosphate hydrolase (EC 3.2.1.93) from Escherichia coli
AAC77196.1: trehalose-6-phosphate hydrolase (TreC) (EC 3.2.1.93)
treC / P28904: trehalose-6-phosphate hydrolase (EC 3.2.1.93) from Escherichia coli

 56% id,
30% cov

BAG86620.1: trehalose-6-phosphate hydrolase (TreC;KP1_0530) (EC 3.2.1.93)

 57% id,
29% cov

More...

glgB L248_RS10130 L248_0785 WP_245585300.1: 1,4-alpha-glucan branching protein GlgB
is similar to:		 PaperBLAST

AAV42863.1: LBA1014 (TreC;La1014) (EC 3.2.1.93)

 27% id,
12% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 8 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory