Curated BLAST for Genomes

 

Curated BLAST

Searching in Schleiferilactobacillus shenzhenensis LY-73 (GCF_000469325.1)

Found 23 curated entries in PaperBLAST's database that match '4.3.1.18' as complete word(s).

These curated entries have 19 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Schleiferilactobacillus shenzhenensis LY-73, or try another query

L248_RS03260 L248_1357 WP_022528642.1: D-serine ammonia-lyase
is similar to:
PaperBLAST

Q4A041: D-Serine ammonia-lyase (EC 4.3.1.18) from Staphylococcus saprophyticus

53% id,
100% cov

SDHD_ECOL6 / Q8FFF4: D-serine dehydratase; D-serine deaminase; DSD; EC 4.3.1.18 from Escherichia coli

51% id,
98% cov

Q8ZL08: D-Serine ammonia-lyase (EC 4.3.1.18) from Salmonella enterica

50% id,
99% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory