Curated BLAST for Genomes

 

Curated BLAST

Searching in Coprobacter fastidiosus NSB1 = JCM 33896 NSB1 (GCF_000473955.1)

Found 162 curated entries in PaperBLAST's database that match '1.1.1.1' as complete word(s).

These curated entries have 134 distinct sequences.

Running ublast with E ≤ 0.01

Found 14 relevant proteins in Coprobacter fastidiosus NSB1 = JCM 33896 NSB1, or try another query

NSB1T_RS19010 NSB1T_07765 WP_284697449.1: aldo/keto reductase
is similar to:
PaperBLAST

Q5JI09: alcohol dehydrogenase (EC 1.1.1.1) from Thermococcus kodakarensis

42% id,
92% cov

Q8TZM9: alcohol dehydrogenase (EC 1.1.1.1) from Pyrococcus furiosus

40% id,
92% cov

fabG NSB1T_RS15785 NSB1T_01920 WP_022390653.1: 3-oxoacyl-[acyl-carrier-protein] reductase
is similar to:
PaperBLAST

Q4J9F2: alcohol dehydrogenase (EC 1.1.1.1) from Sulfolobus acidocaldarius

37% id,
98% cov

Q4J702: alcohol dehydrogenase (EC 1.1.1.1) from Sulfolobus acidocaldarius

34% id,
92% cov

OXI1_COCH4 / N4WE73: Dehydrogenase OXI1; T-toxin biosynthesis protein OXI1; EC 1.1.1.1 from Cochliobolus heterostrophus

31% id,
96% cov

More...

NSB1T_RS19540 NSB1T_10005 WP_009316922.1: gluconate 5-dehydrogenase
is similar to:
PaperBLAST

Q4J702: alcohol dehydrogenase (EC 1.1.1.1) from Sulfolobus acidocaldarius

35% id,
96% cov

Q4J9F2: alcohol dehydrogenase (EC 1.1.1.1) from Sulfolobus acidocaldarius

34% id,
97% cov

ADH1_EUPLT / A0A165U5V5: Short chain aldehyde dehydrogenase 1; ElADH1; Jolkinol C synthase; EC 1.1.1.1; EC 1.1.1.- from Euphorbia lathyris

28% id,
88% cov

More...

NSB1T_RS21705 NSB1T_06790 WP_022600994.1: alcohol dehydrogenase
is similar to:
PaperBLAST

B2ZRE3: alcohol dehydrogenase (EC 1.1.1.1) from Thermus sp.

31% id,
99% cov

ADH_CUPNH / Q0KDL6: Alcohol dehydrogenase; EC 1.1.1.1; EC 1.1.1.4; EC 1.2.1.3 from Cupriavidus necator

31% id,
98% cov

FADH_METMR / P47734: S-(hydroxymethyl)glutathione dehydrogenase; Alcohol dehydrogenase; Glutathione-dependent formaldehyde dehydrogenase; FALDH; FDH; EC 1.1.1.284; EC 1.1.1.1 from Methylobacter marinus

31% id,
98% cov

More...

NSB1T_RS25230 NSB1T_13560 WP_022602001.1: SDR family oxidoreductase
is similar to:
PaperBLAST

Q4J9F2: alcohol dehydrogenase (EC 1.1.1.1) from Sulfolobus acidocaldarius

31% id,
97% cov

Q4J702: alcohol dehydrogenase (EC 1.1.1.1) from Sulfolobus acidocaldarius

30% id,
96% cov

DHS3_CAEEL / A5JYX5: Protein dhs-3; Alcohol dehydrogenase dhs-3; EC 1.1.1.1 from Caenorhabditis elegans

27% id,
62% cov

NSB1T_RS21300 NSB1T_02235 WP_022600936.1: iron-containing alcohol dehydrogenase
is similar to:
PaperBLAST

A4IP64: alcohol dehydrogenase (EC 1.1.1.1); long-chain-alcohol dehydrogenase (EC 1.1.1.192) from Geobacillus thermodenitrificans

30% id,
95% cov

EUTG_ECOLI / P76553: Probable alcohol dehydrogenase EutG; Ethanolamine utilization protein EutG; EC 1.1.1.1 from Escherichia coli

31% id,
93% cov

EUTG_SALTY / P41795: Probable alcohol dehydrogenase EutG; Ethanolamine utilization protein EutG; EC 1.1.1.1 from Salmonella typhimurium

31% id,
93% cov

More...

mgrA NSB1T_RS26865 NSB1T_07695 WP_022602739.1: L-glyceraldehyde 3-phosphate reductase
is similar to:
PaperBLAST

Q8TZM9: alcohol dehydrogenase (EC 1.1.1.1) from Pyrococcus furiosus

30% id,
91% cov

Q5JI09: alcohol dehydrogenase (EC 1.1.1.1) from Thermococcus kodakarensis

30% id,
71% cov

NSB1T_RS16825 NSB1T_08885 WP_022599795.1: iron-containing alcohol dehydrogenase
is similar to:
PaperBLAST

A0A1D3TV27: alcohol dehydrogenase (EC 1.1.1.1) from Anaerobium acetethylicum

27% id,
89% cov

gbsB: alcohol dehydrogenase; EC 1.1.1.1 from Bacillus subtilis

24% id,
96% cov

adh1 / GB|AAA83520.1: NADPH-dependent butanol dehydrogenase; EC 1.1.1.1 from Clostridium saccharobutylicum

25% id,
90% cov

More...

NSB1T_RS16410 NSB1T_08420 WP_022599615.1: aldo/keto reductase
is similar to:
PaperBLAST

Q8TZM9: alcohol dehydrogenase (EC 1.1.1.1) from Pyrococcus furiosus

33% id,
71% cov

Q5JI09: alcohol dehydrogenase (EC 1.1.1.1) from Thermococcus kodakarensis

32% id,
71% cov

NSB1T_RS19385 NSB1T_09835 WP_022600609.1: aldo/keto reductase
is similar to:
PaperBLAST

Q8TZM9: alcohol dehydrogenase (EC 1.1.1.1) from Pyrococcus furiosus

30% id,
73% cov

Q5JI09: alcohol dehydrogenase (EC 1.1.1.1) from Thermococcus kodakarensis

30% id,
71% cov

NSB1T_RS15400 NSB1T_10930 WP_031257994.1: NAD-dependent epimerase/dehydratase family protein
is similar to:
PaperBLAST

YLL056C / Q12177: NADH-dependent aldehyde reductase (EC 1.1.1.77; EC 1.1.1.244; EC 1.1.1.1) from Saccharomyces cerevisiae

23% id,
83% cov

NSB1T_RS16820 NSB1T_08880 WP_022599794.1: NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

YLL056C / Q12177: NADH-dependent aldehyde reductase (EC 1.1.1.77; EC 1.1.1.244; EC 1.1.1.1) from Saccharomyces cerevisiae

28% id,
40% cov

NSB1T_RS27180 NSB1T_04870 WP_022602815.1: NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

YLL056C / Q12177: NADH-dependent aldehyde reductase (EC 1.1.1.77; EC 1.1.1.244; EC 1.1.1.1) from Saccharomyces cerevisiae

35% id,
24% cov

NSB1T_RS17935 NSB1T_00735 WP_022600098.1: TIGR01777 family oxidoreductase
is similar to:
PaperBLAST

YLL056C / Q12177: NADH-dependent aldehyde reductase (EC 1.1.1.77; EC 1.1.1.244; EC 1.1.1.1) from Saccharomyces cerevisiae

48% id,
13% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 14 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

283372-284544 (frame +1) on NZ_KI440778.1 Coprobacter fastidiosus NSB1 = JCM 33896 strain NSB1 scaffoldcontig1, whole genome shotgun sequence
is similar to:
PaperBLAST

Q5JI09: alcohol dehydrogenase (EC 1.1.1.1) from Thermococcus kodakarensis
Also see hits to annotated proteins above

31% id,
76% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory