Curated BLAST for Genomes

 

Curated BLAST

Searching in Coprobacter fastidiosus NSB1 = JCM 33896 NSB1 (GCF_000473955.1)

Found 34 curated entries in PaperBLAST's database that match '2.3.3.5' as complete word(s).

These curated entries have 19 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Coprobacter fastidiosus NSB1 = JCM 33896 NSB1, or try another query

NSB1T_RS15940 NSB1T_06710 WP_022599493.1: citrate/2-methylcitrate synthase
is similar to:
PaperBLAST

Q9I5E3: 2-methylcitrate synthase (EC 2.3.3.5) from Pseudomonas aeruginosa

33% id,
99% cov

Pf6N2E2_6062: 2-methylcitrate synthase (EC 2.3.3.5) from Pseudomonas fluorescens

33% id,
99% cov

PRPC1_CORGL / Q8NSH7: 2-methylcitrate synthase 1; 2-MCS; MCS; Citrate synthase 1; CS; EC 2.3.3.5; EC 2.3.3.16 from Corynebacterium glutamicum
Q8NSH7: 2-methylcitrate synthase (EC 2.3.3.5) from Corynebacterium glutamicum

33% id,
99% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory