Curated BLAST for Genomes

 

Curated BLAST

Searching in Derxia gummosa DSM 723 (GCF_000482785.1)

Found 5 curated entries in PaperBLAST's database that match '2.6.1.66' as complete word(s).

These curated entries have 2 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Derxia gummosa DSM 723, or try another query

H566_RS0106475 WP_028310802.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

AVTA_MYCTU / P96847: Valine--pyruvate aminotransferase; Alanine--valine transaminase; EC 2.6.1.66 from Mycobacterium tuberculosis

43% id,
98% cov

H566_RS0103260 WP_028310306.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

AVTA_MYCTU / P96847: Valine--pyruvate aminotransferase; Alanine--valine transaminase; EC 2.6.1.66 from Mycobacterium tuberculosis

27% id,
98% cov

hisC H566_RS0107815 WP_028311004.1: histidinol-phosphate transaminase
is similar to:
PaperBLAST

AVTA_MYCTU / P96847: Valine--pyruvate aminotransferase; Alanine--valine transaminase; EC 2.6.1.66 from Mycobacterium tuberculosis

25% id,
76% cov

H566_RS0100230 WP_028309846.1: aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
is similar to:
PaperBLAST

AVTA_MYCTU / P96847: Valine--pyruvate aminotransferase; Alanine--valine transaminase; EC 2.6.1.66 from Mycobacterium tuberculosis

28% id,
55% cov

H566_RS0121370 WP_028313041.1: PLP-dependent aminotransferase family protein
is similar to:
PaperBLAST

AVTA_MYCTU / P96847: Valine--pyruvate aminotransferase; Alanine--valine transaminase; EC 2.6.1.66 from Mycobacterium tuberculosis

29% id,
50% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory