Curated BLAST for Genomes

 

Curated BLAST

Searching in Derxia gummosa DSM 723 (GCF_000482785.1)

Found 529 curated entries in PaperBLAST's database that match '3.2.1.21' as complete word(s).

These curated entries have 444 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Derxia gummosa DSM 723, or try another query

H566_RS23475 WP_051378274.1: beta-glucosidase
is similar to:
PaperBLAST

AAF21798.1: β-glucosidase (SalA) (EC 3.2.1.21)

60% id,
97% cov

AGS08637.1: β-glucosidase (SBGL) (EC 3.2.1.21)

51% id,
98% cov

BAA03152.1: β-glucosidase (CgB) (EC 3.2.1.21)

50% id,
96% cov

More...

nagZ H566_RS0120725 WP_034412326.1: beta-N-acetylhexosaminidase
is similar to:
PaperBLAST

AEF56853.1: β-glucosidase A3 (EC 3.2.1.21)

30% id,
45% cov

NAG3_CELFI / Q7WUL3: Beta-N-acetylglucosaminidase/beta-glucosidase; 3-beta-N-acetyl-D-glucosaminidase/beta-D-glucosidase; Nag3; EC 3.2.1.21; EC 3.2.1.52 from Cellulomonas fimi
AAQ05801.1: bifunctional N-acetyl-β-glucosaminidase/β-glucosidase (Nag3) (acts as a phosphorylase in presence of phosphate) (Nag3A) (EC 3.2.1.21|3.2.1.52|2.4.1.-)

28% id,
47% cov

H566_RS25325 WP_034411838.1: DUF2520 domain-containing protein
is similar to:
PaperBLAST

CAB56688.1: β-glucosidase (SCO0458) (EC 3.2.1.21)

26% id,
42% cov

H566_RS0105840 WP_169732490.1: cellulase family glycosylhydrolase
is similar to:
PaperBLAST

ACT78497.1: β-glucosidase / cellodextrinase (CldC; Bbr_0109) (EC 3.2.1.21)

30% id,
30% cov

H566_RS23825 WP_245591309.1: TolC family protein
is similar to:
PaperBLAST

AGU12029.1: c84_2 (EC 3.2.1.21|3.2.1.37)

33% id,
16% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 15 reading frames. Except for 12 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

16040-17053 (frame +2) on NZ_KI519500.1 Derxia gummosa DSM 723 H566DRAFT_scaffold00007.7, whole genome shotgun sequence
is similar to:
PaperBLAST

psu1 / RF|NP_593500.1: cell wall protein Psu1, beta-glucosidase (predicted); EC 3.2.1.21 from Schizosaccharomyces pombe

33% id,
36% cov

43975-46806 (frame +1) on NZ_AXWS01000015.1 Derxia gummosa DSM 723 H566DRAFT_scaffold00006.6_C, whole genome shotgun sequence
is similar to:
PaperBLAST

AAA23091.1: β-glucosidase (EC 3.2.1.21)

41% id,
25% cov

360677-361834 (frame +2) on NZ_AXWS01000007.1 Derxia gummosa DSM 723 H566DRAFT_scaffold00001.1_C, whole genome shotgun sequence
is similar to:
PaperBLAST

AAA23091.1: β-glucosidase (EC 3.2.1.21)

36% id,
23% cov

929747-930613 (frame -2) on NZ_AXWS01000008.1 Derxia gummosa DSM 723 H566DRAFT_scaffold00002.2_C, whole genome shotgun sequence
is similar to:
PaperBLAST

psu1 / RF|NP_593500.1: cell wall protein Psu1, beta-glucosidase (predicted); EC 3.2.1.21 from Schizosaccharomyces pombe

34% id,
24% cov

640638-641975 (frame -1) on NZ_AXWS01000008.1 Derxia gummosa DSM 723 H566DRAFT_scaffold00002.2_C, whole genome shotgun sequence
is similar to:
PaperBLAST

AAA23091.1: β-glucosidase (EC 3.2.1.21)

32% id,
24% cov

541825-542634 (frame +1) on NZ_AXWS01000008.1 Derxia gummosa DSM 723 H566DRAFT_scaffold00002.2_C, whole genome shotgun sequence
is similar to:
PaperBLAST

psu1 / RF|NP_593500.1: cell wall protein Psu1, beta-glucosidase (predicted); EC 3.2.1.21 from Schizosaccharomyces pombe

28% id,
26% cov

257140-258363 (frame -1) on NZ_AXWS01000014.1 Derxia gummosa DSM 723 H566DRAFT_scaffold00005.5_C, whole genome shotgun sequence
is similar to:
PaperBLAST

AAA23091.1: β-glucosidase (EC 3.2.1.21)

36% id,
20% cov

169414-170379 (frame -2) on NZ_AXWS01000007.1 Derxia gummosa DSM 723 H566DRAFT_scaffold00001.1_C, whole genome shotgun sequence
is similar to:
PaperBLAST

AAA23091.1: β-glucosidase (EC 3.2.1.21)

32% id,
21% cov

24861-27029 (frame -2) on NZ_AXWS01000014.1 Derxia gummosa DSM 723 H566DRAFT_scaffold00005.5_C, whole genome shotgun sequence
is similar to:
PaperBLAST

AAA23091.1: β-glucosidase (EC 3.2.1.21)

38% id,
15% cov

579975-581189 (frame +3) on NZ_AXWS01000007.1 Derxia gummosa DSM 723 H566DRAFT_scaffold00001.1_C, whole genome shotgun sequence
is similar to:
PaperBLAST

AAA23091.1: β-glucosidase (EC 3.2.1.21)

37% id,
15% cov

236933-237256 (frame -2) on NZ_AXWS01000008.1 Derxia gummosa DSM 723 H566DRAFT_scaffold00002.2_C, whole genome shotgun sequence
is similar to:
PaperBLAST

psu1 / RF|NP_593500.1: cell wall protein Psu1, beta-glucosidase (predicted); EC 3.2.1.21 from Schizosaccharomyces pombe

32% id,
16% cov

650677-651168 (frame -2) on NZ_KI519499.1 Derxia gummosa DSM 723 H566DRAFT_scaffold00003.3, whole genome shotgun sequence
is similar to:
PaperBLAST

GAM40530.1: β-glucosidase 3A (TCE0_039f12945) (Bgl3A) (EC 3.2.1.21)
Also see hits to annotated proteins above

31% id,
6% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory