Searching in Derxia gummosa DSM 723 (GCF_000482785.1)
Found 4 curated entries in PaperBLAST's database that match '5.3.3.7' as complete word(s).
These curated entries have 3 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Derxia gummosa DSM 723, or try another query
| prpF H566_RS0121285 WP_028313027.1: 2-methylaconitate cis-trans isomerase PrpF is similar to: | PaperBLAST |
Q8EJW4: aconitate DELTA-isomerase (EC 5.3.3.7) from Shewanella oneidensis | 81% id, 98% cov |
ADI1 / A0A0U2X0E4: aconitate-Δ-isomerase 1 (EC 5.3.3.7) from Ustilago maydis | 33% id, 80% cov |
| modA H566_RS0116655 WP_028312319.1: molybdate ABC transporter substrate-binding protein is similar to: | PaperBLAST |
AIS_PSESP / A0A0A1H8I4: Aconitate isomerase; AI; EC 5.3.3.7 from Pseudomonas sp. | 46% id, 98% cov |
| H566_RS0106720 WP_028310838.1: substrate-binding domain-containing protein is similar to: | PaperBLAST |
AIS_PSESP / A0A0A1H8I4: Aconitate isomerase; AI; EC 5.3.3.7 from Pseudomonas sp. | 41% id, 89% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 33290-34738 (frame +2) on NZ_KI519500.1 Derxia gummosa DSM 723 H566DRAFT_scaffold00007.7, whole genome shotgun sequence is similar to: | PaperBLAST |
Q8EJW4: aconitate DELTA-isomerase (EC 5.3.3.7) from Shewanella oneidensis | 80% id, 99% cov |
Lawrence Berkeley National Laboratory