Curated BLAST
Searching in Derxia gummosa DSM 723 (GCF_000482785.1)
Found 21 curated entries in PaperBLAST's database that match '6.3.4.5' as complete word(s).
These curated entries have 16 distinct sequences.
Running ublast with E ≤ 0.01
Found 1 relevant proteins in Derxia gummosa DSM 723, or try another query
mnmA H566_RS0121780 WP_028313103.1: tRNA 2-thiouridine(34) synthase MnmA
is similar to: | PaperBLAST |
ASSY_RAT / P09034: Argininosuccinate synthase; Citrulline--aspartate ligase; EC 6.3.4.5 from Rattus norvegicus | 30% id,
31% cov |
ASSY_MOUSE / P16460: Argininosuccinate synthase; Citrulline--aspartate ligase; EC 6.3.4.5 from Mus musculus
P16460: argininosuccinate synthase (EC 6.3.4.5) from Mus musculus | 30% id,
31% cov |
ASSY_HUMAN / P00966: Argininosuccinate synthase; Citrulline--aspartate ligase; EC 6.3.4.5 from Homo sapiens
ASS1 / P00966: Argininosuccinate synthase (EC 6.3.4.5) from Homo sapiens
P00966: argininosuccinate synthase (EC 6.3.4.5) from Homo sapiens | 29% id,
31% cov |
ASSY_BOVIN / P14568: Argininosuccinate synthase; Citrulline--aspartate ligase; EC 6.3.4.5 from Bos taurus | 27% id,
31% cov |
ASSY_YEAST / P22768: Argininosuccinate synthase; Citrulline--aspartate ligase; EC 6.3.4.5 from Saccharomyces cerevisiae | 27% id,
31% cov |
ARG1: argininosuccinate synthase; EC 6.3.4.5 from Candida albicans | 36% id,
21% cov |
S4V5K7: argininosuccinate synthase (EC 6.3.4.5) from Protopterus annectens | 37% id,
19% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins.
These remaining reading frames may be pseudogenes, omissions in the genome annotation,
or N-terminal extensions of annotated proteins.
396607-398682 (frame +1) on NZ_AXWS01000007.1 Derxia gummosa DSM 723 H566DRAFT_scaffold00001.1_C, whole genome shotgun sequence
is similar to: | PaperBLAST |
ASSY_THET8 / P59846: Argininosuccinate synthase; Citrulline--aspartate ligase; EC 6.3.4.5 from Thermus thermophilus | 61% id,
98% cov |
Q2Z0F6: argininosuccinate synthase (EC 6.3.4.5) from Agaricus bisporus | 49% id,
99% cov |
S4V5K7: argininosuccinate synthase (EC 6.3.4.5) from Protopterus annectens
Also see hits to annotated proteins above | 51% id,
91% cov |
H9BG20: argininosuccinate synthase (EC 6.3.4.5) from Leishmania donovani | 47% id,
99% cov |
A4I066: argininosuccinate synthase (EC 6.3.4.5) from Leishmania infantum | 47% id,
99% cov |
ASSY_THEMA / Q9X2A1: Argininosuccinate synthase; Citrulline--aspartate ligase; EC 6.3.4.5 from Thermotoga maritima | 48% id,
97% cov |
ASSY_SCHPO / O94354: Argininosuccinate synthase; Citrulline--aspartate ligase; EC 6.3.4.5 from Schizosaccharomyces pombe
arg12 / RF|NP_595183.1: argininosuccinate synthase (predicted); EC 6.3.4.5 from Schizosaccharomyces pombe | 47% id,
98% cov |
ASSY_HUMAN / P00966: Argininosuccinate synthase; Citrulline--aspartate ligase; EC 6.3.4.5 from Homo sapiens
ASS1 / P00966: Argininosuccinate synthase (EC 6.3.4.5) from Homo sapiens
P00966: argininosuccinate synthase (EC 6.3.4.5) from Homo sapiens
Also see hits to annotated proteins above | 47% id,
97% cov |
ASSY_MOUSE / P16460: Argininosuccinate synthase; Citrulline--aspartate ligase; EC 6.3.4.5 from Mus musculus
P16460: argininosuccinate synthase (EC 6.3.4.5) from Mus musculus
Also see hits to annotated proteins above | 47% id,
97% cov |
ASSY_RAT / P09034: Argininosuccinate synthase; Citrulline--aspartate ligase; EC 6.3.4.5 from Rattus norvegicus
Also see hits to annotated proteins above | 47% id,
97% cov |
ASSY_BOVIN / P14568: Argininosuccinate synthase; Citrulline--aspartate ligase; EC 6.3.4.5 from Bos taurus
Also see hits to annotated proteins above | 47% id,
97% cov |
ASSY_YEAST / P22768: Argininosuccinate synthase; Citrulline--aspartate ligase; EC 6.3.4.5 from Saccharomyces cerevisiae
Also see hits to annotated proteins above | 46% id,
95% cov |
ARG1: argininosuccinate synthase; EC 6.3.4.5 from Candida albicans
Also see hits to annotated proteins above | 46% id,
85% cov |
BT3760: arginosuccinate synthetase (EC 6.3.4.5) from Bacteroides thetaiotaomicron | 31% id,
99% cov |
N515DRAFT_3766: arginosuccinate synthetase (EC 6.3.4.5) from Dyella japonica | 31% id,
96% cov |
ASSY_ECOLI / P0A6E4: Argininosuccinate synthase; Citrulline--aspartate ligase; EC 6.3.4.5 from Escherichia coli
ArgG / b3172: argininosuccinate synthetase (EC 6.3.4.5) from Escherichia coli | 26% id,
96% cov |
More... |
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory