Curated BLAST for Genomes

 

Curated BLAST

Searching in Dechloromonas agitata is5 (GCF_000519045.1)

Found 75 curated entries in PaperBLAST's database that match '2.6.1.42' as complete word(s).

These curated entries have 59 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Dechloromonas agitata is5, or try another query

K420_RS0117620 WP_027459212.1: branched-chain amino acid transaminase
is similar to:		 PaperBLAST

BPHYT_RS16285: Branched-chain amino acid aminotransferase (EC 2.6.1.42) from Burkholderia phytofirmans

 71% id,
100% cov

Psest_0450: Branched-chain amino acid aminotransferase (EC 2.6.1.42) from Pseudomonas stutzeri

 69% id,
100% cov

ilvE / O86428: branched-chain-amino-acid aminotransferase subunit (EC 2.6.1.6; EC 2.6.1.42) from Pseudomonas aeruginosa
O86428: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Pseudomonas aeruginosa

 68% id,
100% cov

More...

K420_RS0105240 WP_027457136.1: branched-chain amino acid transaminase
is similar to:		 PaperBLAST

BPHYT_RS16285: Branched-chain amino acid aminotransferase (EC 2.6.1.42) from Burkholderia phytofirmans

 56% id,
99% cov

Psest_0450: Branched-chain amino acid aminotransferase (EC 2.6.1.42) from Pseudomonas stutzeri

 55% id,
98% cov

ilvE / O86428: branched-chain-amino-acid aminotransferase subunit (EC 2.6.1.6; EC 2.6.1.42) from Pseudomonas aeruginosa
O86428: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Pseudomonas aeruginosa

 55% id,
98% cov

More...

K420_RS0113070 WP_027458459.1: amino acid aminotransferase
is similar to:		 PaperBLAST

TyrB / b4054: tyrosine aminotransferase (EC 2.6.1.57; EC 2.6.1.6; EC 2.6.1.42; EC 2.6.1.1; EC 2.6.1.5; EC 2.6.1.27) from Escherichia coli

 51% id,
100% cov

K420_RS0102760 WP_027456704.1: D-amino acid aminotransferase
is similar to:		 PaperBLAST

A0A1B1L2T7: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Bacillus thuringiensis

 34% id,
95% cov

GB|AAU18968.1: branched-chain amino acid aminotransferase 2; EC 2.6.1.42 from Bacillus cereus

 34% id,
95% cov

E6TUA8: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Evansella cellulosilytica

 31% id,
94% cov

More...

K420_RS18635 WP_051453055.1: PLP-dependent aminotransferase family protein
is similar to:		 PaperBLAST

Ac3H11_1358: L-leucine transaminase; L-isoleucine transaminase (EC 2.6.1.42) from Acidovorax sp.

 29% id,
97% cov

BWI76_RS24235: Branched-chain-amino-acid transaminase (EC 2.6.1.42) from Klebsiella michiganensis

 28% id,
99% cov

AZOBR_RS06555: Branched-chain-amino-acid transaminase (EC 2.6.1.42) from Azospirillum brasilense

 29% id,
90% cov

More...

dapC K420_RS0114010 WP_027458624.1: succinyldiaminopimelate transaminase
is similar to:		 PaperBLAST

BWI76_RS24235: Branched-chain-amino-acid transaminase (EC 2.6.1.42) from Klebsiella michiganensis

 28% id,
82% cov

pabB K420_RS0116865 WP_051453220.1: aminodeoxychorismate synthase component I
is similar to:		 PaperBLAST

F2L0W0: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Thermoproteus uzoniensis

 28% id,
69% cov

F0QW25: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Vulcanisaeta moutnovskia

 31% id,
30% cov

IlvE / b3770: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli
ilvE / RF|YP_026247: branched-chain-amino-acid aminotransferase; EC 2.6.1.42 from Escherichia coli
ilvE / P0AB80: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli

 39% id,
20% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 7 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory